Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5l05
         (678 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48809-4|CAB76413.2|  332|Caenorhabditis elegans Hypothetical pr...    31   0.57 
AF047657-5|AAK18949.1|  335|Caenorhabditis elegans Serpentine re...    31   1.00 
AF047657-6|AAK18946.1|  337|Caenorhabditis elegans Serpentine re...    29   4.0  
Z92812-5|CAB07279.1|  326|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z69664-5|CAE17882.2|  360|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z81484-10|CAE11298.1|  328|Caenorhabditis elegans Hypothetical p...    27   9.3  
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p...    27   9.3  
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>Z48809-4|CAB76413.2|  332|Caenorhabditis elegans Hypothetical
           protein T01E8.7 protein.
          Length = 332

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 102 YCFILKTVFCVSLVLLMVLNLHFPFRLLDL 191
           YC + KT   ++LV L++ NLHF   L+DL
Sbjct: 37  YCILCKTPNQMNLVKLVIFNLHFWSTLMDL 66


>AF047657-5|AAK18949.1|  335|Caenorhabditis elegans Serpentine
           receptor, class h protein241 protein.
          Length = 335

 Score = 30.7 bits (66), Expect = 1.00
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +3

Query: 99  AYCFILKTVFCVSLVLLMVLNLHFPFRLLDLI 194
           AYC + KT   +  V L++LNLHF   L DL+
Sbjct: 41  AYCILYKTPSRMKSVKLLMLNLHFWSCLSDLV 72


>AF047657-6|AAK18946.1|  337|Caenorhabditis elegans Serpentine
           receptor, class h protein243 protein.
          Length = 337

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +3

Query: 69  IEIYNKFYCSAYCFILKTVFCVSLVLLMVLNLHFPFRLLDL 191
           IEI    Y  AYC + +T   +  V  ++LNLHF   L DL
Sbjct: 31  IEIPLSIY-GAYCILFQTPAKMKPVQFLILNLHFWNTLSDL 70


>Z92812-5|CAB07279.1|  326|Caenorhabditis elegans Hypothetical
           protein T03E6.5 protein.
          Length = 326

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3

Query: 99  AYCFILKTVFCVSLVLLMVLNLHFPFRLLDL 191
           AYC + KT   +  V   +LNLHF    LDL
Sbjct: 26  AYCILCKTPITMKSVKWSMLNLHFWSVFLDL 56


>Z69664-5|CAE17882.2|  360|Caenorhabditis elegans Hypothetical
           protein K04D7.6 protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 353 PLPSRTQSSEPCESVPIPNNV 415
           P+P  +QSS P  S+PIPN +
Sbjct: 305 PIPIVSQSSIPESSIPIPNRI 325


>Z81484-10|CAE11298.1|  328|Caenorhabditis elegans Hypothetical
           protein C47A10.11 protein.
          Length = 328

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 102 YCFILKTVFCVSLVLLMVLNLHFPFRLLDLI 194
           YC + KT   +  V   + NLHF   L DL+
Sbjct: 32  YCILFKTPLAMKSVKWSLFNLHFWASLFDLL 62


>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical protein
            C34E11.3 protein.
          Length = 1577

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +2

Query: 557  YHEPGPSGACSLPARK--RPRTSLSQGVDVCNVSQYLQYEL 673
            YHEP  S   S+P RK      S+S+     N SQ+ + E+
Sbjct: 1363 YHEPSSSNNLSVPGRKTSNDEYSMSRAASFDNRSQFSEDEV 1403


>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
            protein C34E11.3 protein.
          Length = 1577

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +2

Query: 557  YHEPGPSGACSLPARK--RPRTSLSQGVDVCNVSQYLQYEL 673
            YHEP  S   S+P RK      S+S+     N SQ+ + E+
Sbjct: 1363 YHEPSSSNNLSVPGRKTSNDEYSMSRAASFDNRSQFSEDEV 1403


>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical protein
            C34E11.3 protein.
          Length = 1577

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +2

Query: 557  YHEPGPSGACSLPARK--RPRTSLSQGVDVCNVSQYLQYEL 673
            YHEP  S   S+P RK      S+S+     N SQ+ + E+
Sbjct: 1363 YHEPSSSNNLSVPGRKTSNDEYSMSRAASFDNRSQFSEDEV 1403


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,723,447
Number of Sequences: 27780
Number of extensions: 215859
Number of successful extensions: 612
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)