Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5l02
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   1.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.3  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   4.3  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   4.3  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   5.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   7.6  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 437 VKGICDDICVLCQFGKAIEFCENF 366
           V G+ +++C LCQ   +I   +NF
Sbjct: 214 VHGVHNELCNLCQVANSIYGFQNF 237


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 518 HFWQWLFWITSHFFV 474
           H W WL W+ S  ++
Sbjct: 463 HAWIWLLWLLSQTWI 477


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 518 HFWQWLFWITSHFFV 474
           H W WL W+ S  ++
Sbjct: 463 HAWIWLLWLLSQTWI 477


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 518 HFWQWLFWITSHFFV 474
           H W WL W+ S  ++
Sbjct: 463 HAWIWLLWLLSQTWI 477


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 518 HFWQWLFWITSHFFV 474
           H W WL W+ S  ++
Sbjct: 463 HAWIWLLWLLSQTWI 477


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 73   KIVWPYLVYLNF 108
            KIVW +LVY++F
Sbjct: 989  KIVWLHLVYISF 1000


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 73  KIVWPYLVYLNF 108
           KIVW +LVY++F
Sbjct: 270 KIVWLHLVYISF 281


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 518 HFWQWLFWITSHFFV 474
           H W WL W+ S  ++
Sbjct: 217 HAWIWLVWLLSQAWI 231


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 518 HFWQWLFWITSHFFV 474
           H W WL W+ S  ++
Sbjct: 450 HAWIWLVWLLSQAWI 464


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -2

Query: 518 HFWQWLFWITSHFFV 474
           H W WL W+ S  ++
Sbjct: 450 HAWIWLVWLLSQAWI 464


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 141 KSHRVIPEIKMTEDKEVTVETNGQEENAKTEN 236
           K   V+PE+   E+ +  V+ +  E   KTE+
Sbjct: 154 KPKTVVPEVGGVEEAKGPVDLSKSEPEKKTES 185


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 615 QFQEVENVIMRRYVEKSTKKRLF 683
           +F+ + N+I R  V  +T K+LF
Sbjct: 115 RFEMINNIITRGDVTSTTIKKLF 137


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 537 LYEAPRSFLAVAVLDYVSLFCYL 469
           +Y+AP   L + +  Y+S+ CY+
Sbjct: 127 VYQAPVLQLFLYIFTYLSVTCYV 149


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -2

Query: 479 FVIFRNLQ*STRRFVKGICDDICVLCQ 399
           +V+   L+      +K +C D+C+L +
Sbjct: 177 YVMTGQLKAQNSNLLKSVCADLCLLSE 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,238
Number of Sequences: 336
Number of extensions: 3153
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)