Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5l02
         (717 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    25   2.3  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    24   4.1  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    24   5.4  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   9.5  

>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 218 LLLSIGFNSYLFVLGHFDFWNN 153
           LL+++    YLFV   +++W+N
Sbjct: 10  LLVALATGLYLFVRNRYNYWSN 31


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +1

Query: 40  TRVFQFKSYFFKIVWPYLVYLNFEASINLFSEIRSLIVLF 159
           +R+ + +S+F  +V  Y  +L +  S+N+   I  L+V+F
Sbjct: 136 SRIKEIESHFGSVVASYFTFLRWLFSVNIV--ISVLLVVF 173


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +3

Query: 396 KLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKE 539
           +L E   ++   +  S   L E   + ++ R +      E  EELRKE
Sbjct: 91  RLEEQIQLLRLQMEASNEQLKEAQREAREAREDARVREAEHREELRKE 138


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/26 (30%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = -2

Query: 548 VAYFFTKLLVHF-WQWLFWITSHFFV 474
           + Y F  ++  F W WL W+ S  ++
Sbjct: 106 IYYLFDYVVNEFSWLWLLWLLSQTWI 131


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,514
Number of Sequences: 2352
Number of extensions: 13891
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)