Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5l02
(717 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 179 2e-45
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 57 1e-08
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 57 1e-08
U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna bindi... 54 8e-08
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 54 8e-08
AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical ... 33 0.15
Z49909-12|CAA90114.2| 121|Caenorhabditis elegans Hypothetical p... 32 0.36
AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical ... 31 0.62
AF016417-3|AAB65281.1| 457|Caenorhabditis elegans Hypothetical ... 30 1.9
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 29 2.5
AF067947-3|AAC19231.1| 451|Caenorhabditis elegans Hypothetical ... 29 2.5
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 29 2.5
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 29 2.5
U34354-1|AAC47127.1| 171|Caenorhabditis elegans cyclophilin iso... 29 3.3
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 29 3.3
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 29 3.3
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 29 4.4
AL032656-1|CAA21730.1| 223|Caenorhabditis elegans Hypothetical ... 29 4.4
Z81057-1|CAB02914.2| 460|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light c... 28 5.8
Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light c... 28 5.8
U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light ... 28 5.8
U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light ... 28 5.8
U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light ... 28 5.8
U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light ... 28 5.8
AF040657-4|AAB95053.1| 261|Caenorhabditis elegans Hypothetical ... 28 5.8
AC006695-9|AAF39977.1| 453|Caenorhabditis elegans Hypothetical ... 28 5.8
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 28 7.7
AL034393-9|CAA22314.1| 248|Caenorhabditis elegans Hypothetical ... 28 7.7
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 28 7.7
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 179 bits (435), Expect = 2e-45
Identities = 83/155 (53%), Positives = 114/155 (73%)
Frame = +3
Query: 252 ELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANA 431
+ D II+Q+EYYFG++NL RDKFLQE++K DDGWVP+ + FNRLA +++DT+ IANA
Sbjct: 11 DADQKIIKQLEYYFGNINLPRDKFLQEKLKEDDGWVPITTMLNFNRLASISKDTEKIANA 70
Query: 432 LNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYF 611
+ S SG++ VSEDN+K+RRN E P+PE + E ++I +R++Y KGF+ D LDD++ +
Sbjct: 71 VKNSGSGIISVSEDNQKIRRNEENPVPENSLEYWQKIKHRTVYMKGFSTDTQLDDIIQWA 130
Query: 612 KQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTR 716
QF E ENV+MRR R FKGSVF T+KTR
Sbjct: 131 NQFGETENVLMRRL---KPGDRTFKGSVFITYKTR 162
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/79 (37%), Positives = 49/79 (62%)
Frame = +3
Query: 252 ELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANA 431
E+ + Q+EYYF NL D++L+ Q+ D +VP+ +L F ++ +LT D D+I A
Sbjct: 137 EIKQLLKNQLEYYFSRENLSSDRYLKCQMD-SDNYVPINVLAGFPKIMRLTTDVDLIVEA 195
Query: 432 LNKSTSGLLEVSEDNKKVR 488
L +ST+ +E+ E +KVR
Sbjct: 196 LKESTN--VELDEKFEKVR 212
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/79 (37%), Positives = 49/79 (62%)
Frame = +3
Query: 252 ELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANA 431
E+ + Q+EYYF NL D++L+ Q+ D +VP+ +L F ++ +LT D D+I A
Sbjct: 39 EIKQLLKNQLEYYFSRENLSSDRYLKCQMD-SDNYVPINVLAGFPKIMRLTTDVDLIVEA 97
Query: 432 LNKSTSGLLEVSEDNKKVR 488
L +ST+ +E+ E +KVR
Sbjct: 98 LKESTN--VELDEKFEKVR 114
>U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform a protein.
Length = 868
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/72 (36%), Positives = 46/72 (63%)
Frame = +3
Query: 273 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 452
+Q+EYYF + NL +D FL+ ++ +G++P+ ++ F R+ LTED +I AL ST
Sbjct: 329 KQIEYYFSEENLQKDFFLRRKMG-PEGYLPVALIASFPRVRSLTEDYSLILEALKDSTK- 386
Query: 453 LLEVSEDNKKVR 488
+++S D ++R
Sbjct: 387 -VDMSPDGLQIR 397
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/72 (36%), Positives = 46/72 (63%)
Frame = +3
Query: 273 RQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSG 452
+Q+EYYF + NL +D FL+ ++ +G++P+ ++ F R+ LTED +I AL ST
Sbjct: 526 KQIEYYFSEENLQKDFFLRRKMG-PEGYLPVALIASFPRVRSLTEDYSLILEALKDSTK- 583
Query: 453 LLEVSEDNKKVR 488
+++S D ++R
Sbjct: 584 -VDMSPDGLQIR 594
>AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical
protein F55A12.5 protein.
Length = 849
Score = 33.5 bits (73), Expect = 0.15
Identities = 39/157 (24%), Positives = 60/157 (38%), Gaps = 5/157 (3%)
Frame = +3
Query: 162 EIKMTEDKEVTVETNGQEENAKTENSEDETELDIA-----IIRQVEYYFGDVNLHRDKFL 326
E + ED E E +EE + E+ + TE + II Q F D + +
Sbjct: 683 EYEEYEDDEDEDEYYEEEEENEVEDDDFLTETQLEELMEQIILQTSVMFRDQRMKKFGLE 742
Query: 327 QEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQP 506
+E IK D +L +LAK+TE +N L S + K + P Q
Sbjct: 743 KEMIKFDGATDEEILLQAEQKLAKITETLKTTSNKL----QNFCTPSSSSVKTHQ-PLQA 797
Query: 507 LPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQ 617
+P +L K + + S G D + L +Q
Sbjct: 798 MPSAVSKLEKSVDHDSKKCLGCQSDEVQEAALRRLEQ 834
>Z49909-12|CAA90114.2| 121|Caenorhabditis elegans Hypothetical
protein C14A4.10 protein.
Length = 121
Score = 32.3 bits (70), Expect = 0.36
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Frame = +3
Query: 177 EDKEVTVETNGQEENAKTENSEDETELDIAIIRQVEYYFGDVNLHRDKFLQ--EQIKLDD 350
+D+E ++ +++ K N ED+ + +R + Y FGD DK L E I L+
Sbjct: 2 DDEEDLFGSDAEDDKEKVVNPEDKKHVLRRDLRSMVYGFGDDKEPYDKTLDTLEAIVLNY 61
Query: 351 GWVPLEILTKFNRLAKLT-EDTDVIANALNKSTS---GLLEVSEDNKKVRRNPEQPLPEM 518
++ K + K+ ED + K S LL +SE+ KK R+ E P++
Sbjct: 62 IKELCQLAMKVGKPDKMALEDIHYLIRRDPKKFSRVKDLLSMSEELKKARKQFEDMKPQL 121
>AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical
protein Y6B3B.4 protein.
Length = 561
Score = 31.5 bits (68), Expect = 0.62
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Frame = +3
Query: 351 GWVPL-EILTKFNRLAKLTEDTDVIA---NALNKSTSGLLEVSEDNKKVRRNPEQPLPEM 518
G+V + E L K + ++TE+ + +A N+LN E E + ++ R E ++
Sbjct: 67 GYVQVPEELEKDDEWREMTEEEESLALEENSLNLEIKQA-EAMEIDAELERQVEMEADKL 125
Query: 519 NEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKST 668
E RK N+ K K ++ N+FK F+E+ ++ +E+ +
Sbjct: 126 EREHRK---NQKNLKKEEKKQEKQQEMENFFKVFEEIRSLAWSELMEQES 172
>AF016417-3|AAB65281.1| 457|Caenorhabditis elegans Hypothetical
protein F17A9.4 protein.
Length = 457
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +3
Query: 501 QPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKR 677
QP+P E+++ +I +R +YA FA + D + + ++ ++ +T KR
Sbjct: 160 QPVPLSTEQIKTQIIDRFVYAAKFAYETGFDGV-----ELHGAHGYLLAQFTSPTTNKR 213
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/79 (22%), Positives = 43/79 (54%)
Frame = +3
Query: 471 DNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 650
D KK+ +P+ P+ + + + ++ G + ++L+D+ YF+ + +VE+ ++
Sbjct: 111 DGKKI--DPKVAFPKRTQA-KLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAML-- 165
Query: 651 YVEKSTKKRLFKGSVFATF 707
+K+T++ +G F TF
Sbjct: 166 MFDKATQRH--RGFGFVTF 182
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 486 RRNPEQPLPEMNEELRKEICNRS--IYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 650
R + QP EL K I R + GF KD +L+D++ +F ++ N I R
Sbjct: 849 RGDDSQPSQSELMELIKSIGPRGTVLSCNGFPKDVTLEDVVEFFNDYEPDRNSIRIR 905
>AF067947-3|AAC19231.1| 451|Caenorhabditis elegans Hypothetical
protein T10B5.8 protein.
Length = 451
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 501 QPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRL 680
+P P E++ E+ +R +YA FA + D + Q ++ ++ +T KR+
Sbjct: 160 KPKPLSTEQVETEVVDRFVYAAKFAYECGFDGI-----QLHGAHGYLLSQFTSPTTNKRV 214
Query: 681 FK 686
K
Sbjct: 215 DK 216
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +3
Query: 363 LEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEI 542
LE+ + + +L K ED + L K LEVS K + PE E+LRKE+
Sbjct: 351 LEVKSLYEKLQKSAEDRQKVETTL-KLDRDRLEVSLVTMKKKLESTPEAPENVEKLRKEL 409
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/79 (22%), Positives = 43/79 (54%)
Frame = +3
Query: 471 DNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 650
D KK+ +P+ P+ + + + ++ G + ++L+D+ YF+ + +VE+ ++
Sbjct: 111 DGKKI--DPKVAFPKRTQA-KLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAML-- 165
Query: 651 YVEKSTKKRLFKGSVFATF 707
+K+T++ +G F TF
Sbjct: 166 MFDKATQRH--RGFGFVTF 182
>U34354-1|AAC47127.1| 171|Caenorhabditis elegans cyclophilin
isoform 2 (cyp-2) protein.
Length = 171
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +3
Query: 108 RSLNKLVF*NQKSHRVIPEIKMTEDKEVTVETNGQEENAKTENSEDE 248
+S KL F K HR+IPE M + + T E NG E+ E +DE
Sbjct: 48 KSGKKLHFKGSKFHRIIPEF-MIQGGDFT-EGNGTGESIHGEKFDDE 92
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +3
Query: 327 QEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQP 506
++++K D G+ F+R+ L ED DV A A N S G L + K+ + P
Sbjct: 78 EQELKTDHGYSK----KSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKKEAVQGRSIP 133
Query: 507 LPE 515
+ +
Sbjct: 134 IQQ 136
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +3
Query: 327 QEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQP 506
++++K D G+ F+R+ L ED DV A A N S G L + K+ + P
Sbjct: 78 EQELKTDHGYSK----KSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKKEAVQGRSIP 133
Query: 507 LPE 515
+ +
Sbjct: 134 IQQ 136
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 427 FAMTSVSSVSLARRLNFVRISNGTHPSSNFICSCRNLSRCRFTSP-K*YSTCR 272
F TS SS +L V++ + P + + +C N S C+++S + Y CR
Sbjct: 613 FCTTSSSSSNLCSAGQTVQLDSSNQPINCLVSTCPNNSFCQYSSSGQRYVCCR 665
>AL032656-1|CAA21730.1| 223|Caenorhabditis elegans Hypothetical
protein Y106G6E.3 protein.
Length = 223
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 396 KLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL-PEMNEELRKEICNRSIYAKGF 572
KLT T + + + S + ++E+ KK + PE+PL E E R C +K
Sbjct: 43 KLTMSTSTLESEKEELNSVEMVLAEEIKKEEKEPEKPLINETMSEDRSVACGNKSDSKEL 102
Query: 573 AKDASLD 593
+ AS D
Sbjct: 103 KEMASPD 109
>Z81057-1|CAB02914.2| 460|Caenorhabditis elegans Hypothetical
protein F10D11.2 protein.
Length = 460
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 513 EMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVEN 635
EMN +L I +++IY GF A+ NY + + N
Sbjct: 8 EMNPQLNFPISDKTIYQMGFNSSAAQPSAANYVTESNSLTN 48
>Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light
chain (isoform 2) protein.
Length = 522
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 390 LAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEIC 545
L L E+ I+N L S G V ED + P+Q L ++N+ L K +C
Sbjct: 41 LEALREEHSTISNTLETSVKG---VKEDEAPL---PKQKLSQINDNLDKLVC 86
>Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light
chain (isoform 1) protein.
Length = 540
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 390 LAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEIC 545
L L E+ I+N L S G V ED + P+Q L ++N+ L K +C
Sbjct: 20 LEALREEHSTISNTLETSVKG---VKEDEAPL---PKQKLSQINDNLDKLVC 65
>U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light
chain protein 2,isoform b protein.
Length = 540
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 390 LAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEIC 545
L L E+ I+N L S G V ED + P+Q L ++N+ L K +C
Sbjct: 20 LEALREEHSTISNTLETSVKG---VKEDEAPL---PKQKLSQINDNLDKLVC 65
>U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light
chain protein 2,isoform c protein.
Length = 501
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 390 LAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEIC 545
L L E+ I+N L S G V ED + P+Q L ++N+ L K +C
Sbjct: 20 LEALREEHSTISNTLETSVKG---VKEDEAPL---PKQKLSQINDNLDKLVC 65
>U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light
chain protein 2,isoform a protein.
Length = 522
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 390 LAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEIC 545
L L E+ I+N L S G V ED + P+Q L ++N+ L K +C
Sbjct: 41 LEALREEHSTISNTLETSVKG---VKEDEAPL---PKQKLSQINDNLDKLVC 86
>U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light
chain protein 2,isoform d protein.
Length = 531
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +3
Query: 390 LAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEIC 545
L L E+ I+N L S G V ED + P+Q L ++N+ L K +C
Sbjct: 20 LEALREEHSTISNTLETSVKG---VKEDEAPL---PKQKLSQINDNLDKLVC 65
>AF040657-4|AAB95053.1| 261|Caenorhabditis elegans Hypothetical
protein T20H9.4 protein.
Length = 261
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 11/69 (15%)
Frame = +3
Query: 174 TEDKEVTVETNGQEENAKTENSEDETELDIAIIRQ----VEYY-FGD-----VNLHRDKF 323
TED TV NGQ++ + E ++ + D+A+I + +E Y GD V++ +D F
Sbjct: 52 TEDGGTTVHHNGQKKRIEGEQYKERSIKDLAVIFKHASILELYNLGDNVKLLVDILKDSF 111
Query: 324 LQ-EQIKLD 347
+ E IKL+
Sbjct: 112 IHVESIKLN 120
>AC006695-9|AAF39977.1| 453|Caenorhabditis elegans Hypothetical
protein W06H8.2 protein.
Length = 453
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 501 QPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRL 680
+P+P E+++ E+ R +YA +A + D + Q ++ ++ +T KR
Sbjct: 158 KPVPLTPEQIKTEVIERFVYAAKYAYETGFDGV-----QLHGAHGYLLAQFTSPTTNKRT 212
Query: 681 --FKGSV 695
+ GSV
Sbjct: 213 DHYGGSV 219
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 459 EVSEDNKKVRRNPEQPLPEMNEELRK 536
E E ++ R PEQ LP NEE K
Sbjct: 633 EAQEAQEEARPEPEQSLPPFNEETEK 658
>AL034393-9|CAA22314.1| 248|Caenorhabditis elegans Hypothetical
protein Y18D10A.11 protein.
Length = 248
Score = 27.9 bits (59), Expect = 7.7
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Frame = +3
Query: 204 NGQEENAKTENSEDETELDIAIIRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTK 380
N Q K++ ++ EL + ++R D N K L EQ+ D V + L +
Sbjct: 88 NEQLSEEKSQLQKENEELLLVLLRTEGIV--DAN----KSLSEQLANAQDAEVSMTTLKE 141
Query: 381 FNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIY 560
+AKL E+ +V+ + SGL+ D K+ Q E++E ++I
Sbjct: 142 --TVAKLEEENNVLQATWAEERSGLVNELIDTKEKLAKSAQAQTELDES-HRDIMTAVPV 198
Query: 561 AKGFAKDASLDDL 599
AK A D +L
Sbjct: 199 AKRTAMDEMFPEL 211
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 168 KMTEDKEVTVETNGQEENAKTENSEDETELDIAIIRQVE 284
K+TE ++ ETNG+ ++ + SE +EL+ + R+ +
Sbjct: 168 KLTESEKKLKETNGKVTKSRNQLSERVSELEAQLKREAD 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,087,521
Number of Sequences: 27780
Number of extensions: 300436
Number of successful extensions: 1291
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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