Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5k24
(762 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 29 0.21
Y17703-1|CAA76823.1| 111|Anopheles gambiae D7r1 protein protein. 27 0.63
AY045760-1|AAK84942.1| 165|Anopheles gambiae D7-related 1 prote... 27 0.63
AJ133852-1|CAB39727.1| 165|Anopheles gambiae D7-related 1 prote... 27 0.63
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 27 0.83
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 26 1.5
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 25 3.4
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 24 5.9
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 28.7 bits (61), Expect = 0.21
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 303 QAHHRQTQPEVRNGPRFLQAGHEQVWRHAPPRVREDYERLQQNCQTQQESVHEGWERP 476
Q H RQ Q + + + Q +++W R R++ ++ QQ+ Q QQ+ G +P
Sbjct: 285 QQHQRQQQQQQQQRQQQQQQEQQELWTTVVRR-RQNTQQQQQSNQPQQQQQQTGRYQP 341
Score = 23.8 bits (49), Expect = 5.9
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 249 QLRKRGRRQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVWRHAPPRVREDYERLQQ 428
Q +++ ++Q + R Q +Q Q + ++ R Q ++V + R+ ++ QQ
Sbjct: 239 QQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQQ-QQRVQQQNQQHQRQQQQQQQQ 297
Query: 429 NCQTQQESVHEGW 467
Q QQ+ E W
Sbjct: 298 RQQQQQQEQQELW 310
Score = 23.4 bits (48), Expect = 7.8
Identities = 19/80 (23%), Positives = 32/80 (40%)
Frame = +3
Query: 240 APSQLRKRGRRQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVWRHAPPRVREDYER 419
A S +RGR+ ++ R Q H+Q + + + Q +Q + + R
Sbjct: 205 AHSSRNRRGRQGPQQQEQRQQQQQHQQREQQQQQ-----QQQQQQQQQQQQQQQRNQQRE 259
Query: 420 LQQNCQTQQESVHEGWERPR 479
QQ Q QQ E ++ R
Sbjct: 260 WQQQQQQQQHQQREQQQQQR 279
>Y17703-1|CAA76823.1| 111|Anopheles gambiae D7r1 protein protein.
Length = 111
Score = 27.1 bits (57), Expect = 0.63
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 391 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 477
+H+ +K +N K KH+ NL GG +
Sbjct: 75 YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103
>AY045760-1|AAK84942.1| 165|Anopheles gambiae D7-related 1 protein
protein.
Length = 165
Score = 27.1 bits (57), Expect = 0.63
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 391 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 477
+H+ +K +N K KH+ NL GG +
Sbjct: 75 YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103
>AJ133852-1|CAB39727.1| 165|Anopheles gambiae D7-related 1 protein
protein.
Length = 165
Score = 27.1 bits (57), Expect = 0.63
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 391 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 477
+H+ +K +N K KH+ NL GG +
Sbjct: 75 YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 26.6 bits (56), Expect = 0.83
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +3
Query: 249 QLRKRGRRQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVWRHAPPRVREDYERLQQ 428
Q +++G R P + + Q R Q + + + Q G R+ PP++R+ ++ Q
Sbjct: 256 QQQQQGERYVPPQLRQQRQQQQRPRQQQQQQQQQQQQQGE----RYVPPQLRQQRQQQQH 311
Query: 429 NCQTQQE 449
Q QQ+
Sbjct: 312 QQQQQQQ 318
Score = 24.6 bits (51), Expect = 3.4
Identities = 19/83 (22%), Positives = 37/83 (44%)
Frame = +3
Query: 231 QAAAPSQLRKRGRRQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVWRHAPPRVRED 410
Q Q +++ R+Q + + Q H+Q Q + + + Q + + H +
Sbjct: 335 QRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQQPRQSL-PHRKQTQLQL 393
Query: 411 YERLQQNCQTQQESVHEGWERPR 479
RLQQ Q QQ+S + ++P+
Sbjct: 394 SPRLQQQQQQQQQSQQQQQQQPQ 416
Score = 23.8 bits (49), Expect = 5.9
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 357 QAGHEQVWRHAPPRVREDYERLQQNCQTQQE 449
Q +Q R+ PP++R+ ++ Q+ Q QQ+
Sbjct: 255 QQQQQQGERYVPPQLRQQRQQQQRPRQQQQQ 285
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 25.8 bits (54), Expect = 1.5
Identities = 22/79 (27%), Positives = 28/79 (35%)
Frame = +2
Query: 473 SAGLSSYRRPT*SCRSRWTGGSTAPSPTSRTKGSVAHAGPSARLELWKDSTSVSPATWCR 652
S LS+ P S TGG SP+ + H P A ST SP R
Sbjct: 691 SLNLSAGGSPVAVVSSSPTGGHHLASPSPHHHLTSPHGAPLALTSSKSASTHPSPHPATR 750
Query: 653 SRSKNLIDCSEQYGNNGCN 709
+ + I + G G N
Sbjct: 751 ASPSSPIVATSSSGGGGSN 769
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 24.6 bits (51), Expect = 3.4
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 399 VREDYERLQQNCQTQQESVHEGWERPRG 482
++EDY RL+ Q +E +++ RG
Sbjct: 174 LKEDYNRLKHEMQMAEEETQFTYQKKRG 201
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 23.8 bits (49), Expect = 5.9
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +2
Query: 638 ATWCRSRSKNLIDCSEQYGNNGCNGGLMDNAFKYIKDNGGH 760
A W R+ SKN+ +C N D + +GGH
Sbjct: 326 APWGRATSKNVHECKPCNCNGYSTKCFFDRHLYNLTGHGGH 366
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,800
Number of Sequences: 2352
Number of extensions: 16217
Number of successful extensions: 30
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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