Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5k23
(752 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1626 + 28223967-28225294,28225506-28225779,28225939-282262... 91 7e-19
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225... 66 3e-11
11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909... 62 5e-10
08_01_0387 - 3426058-3426168,3426279-3426473,3426612-3426724,342... 41 0.001
07_03_1353 - 25966332-25966421,25966477-25966528,25966612-259668... 40 0.002
07_01_0075 - 558829-560859 37 0.015
06_01_0668 - 4882174-4884204 37 0.015
05_03_0671 + 16831185-16831254,16832017-16832084,16832318-168323... 37 0.020
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 32 0.43
03_02_1011 + 13198641-13198899,13199471-13199604,13199805-131999... 32 0.56
03_06_0179 - 32171712-32171780,32171861-32171920,32172096-321721... 31 0.98
02_02_0136 + 7104633-7105247 31 1.3
01_03_0005 + 11568545-11569119,11569179-11569191 31 1.3
07_01_0240 - 1749674-1750514,1751157-1752040 30 1.7
02_05_0544 + 29876337-29876524,29876850-29876882,29878390-298785... 30 2.3
06_03_1000 - 26778993-26779478 29 3.0
08_01_0078 - 551178-551897,552168-552197 29 4.0
07_01_0862 - 7172083-7172931 29 4.0
06_03_1055 - 27234824-27234838,27236087-27236125,27236322-272373... 29 4.0
05_01_0595 + 5344721-5345249,5349183-5349264,5349813-5350507,535... 29 4.0
12_02_0263 - 16551831-16551909,16552668-16553173 29 5.2
09_04_0487 - 18014469-18014660,18014935-18015016,18015297-180155... 29 5.2
09_02_0543 + 10427321-10428315,10428440-10429154 29 5.2
08_02_0450 - 17266977-17267165,17268017-17268053,17268139-172695... 29 5.2
06_01_1169 + 9996068-9996265,9996356-9998589,9998675-9998926,999... 29 5.2
05_04_0401 - 20982923-20983106,20983129-20983186,20983322-209835... 29 5.2
05_03_0627 - 16342211-16342264,16342332-16342412,16342751-163428... 29 5.2
02_02_0096 - 6727844-6727957,6728149-6728247,6728332-6728410,672... 29 5.2
12_01_0927 + 9196230-9196427,9196499-9197190,9197317-9198351,919... 28 6.9
11_01_0782 + 6543906-6544702,6545717-6547850 28 6.9
09_02_0131 - 4693828-4694019,4694107-4694199,4694294-4694375,469... 28 6.9
07_03_1778 + 29451902-29452166,29452665-29452849,29453504-294536... 28 6.9
03_05_0491 - 24868261-24869383,24869482-24869561,24870193-248702... 28 6.9
02_02_0540 - 11334744-11334832,11335445-11335494,11335574-11336805 28 6.9
10_07_0107 - 12936839-12937030,12937305-12937386,12937476-129375... 28 9.2
03_06_0339 + 33246043-33247350 28 9.2
02_05_0449 - 29107310-29107377,29107732-29107777,29107860-291079... 28 9.2
>07_03_1626 +
28223967-28225294,28225506-28225779,28225939-28226230,
28226492-28226651,28226809-28226917,28227004-28227099
Length = 752
Score = 91.5 bits (217), Expect = 7e-19
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 3/194 (1%)
Frame = +2
Query: 179 VQHYVDSFRVRTVGGNGGDGCISFLSVWCKDHAXXXXXXXXXXXHVIFKATNSVRSLNHC 358
V D+ ++ G+GG+G ++F +V + + SL
Sbjct: 293 VMRCFDTAKIYAKAGDGGNGVVAFRREKYVPLGGPSGGDGGRGGNVFVEVDGDMNSLLPF 352
Query: 359 KAVI--QAKPGEKGFNKDCSGKNAGHVIVNVPIGTIIKNQNGQV-IGDLDREGLMFVXXX 529
+ + +A G G + +G V+V VP GT++++ G V + +L R G +
Sbjct: 353 RKSVHFRAGRGAHGQGRQQAGAKGDDVVVKVPPGTVVRSAAGDVELLELMRPGQRALLLP 412
Query: 530 XXXXXXXNKFFLTDTEQAPDIAEFGAAGETNIYHLEVRSLAHVGLLGFPNAGKSTVLRAI 709
N F + T +AP IAE G G LE++ +A VG++G PNAGKST+L AI
Sbjct: 413 GGRGGRGNAAFKSGTNKAPRIAEKGEKGPEMWIDLELKLVADVGIVGAPNAGKSTLLTAI 472
Query: 710 SRARPNVAPYPFTT 751
S A+P +A YPFTT
Sbjct: 473 SAAKPTIANYPFTT 486
>03_06_0323 +
33121062-33121653,33121748-33121839,33122482-33122565,
33123126-33123203,33123500-33123700,33123821-33123928,
33124145-33124219,33124338-33124537,33124654-33124722,
33125159-33125279,33126840-33127120,33127522-33127594
Length = 657
Score = 66.1 bits (154), Expect = 3e-11
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Frame = +2
Query: 422 AGHVI-VNVPIGTIIKNQNGQVIGDLD---------REGLMFVXXXXXXXXXXNKFFLTD 571
AG + + VP+GT++K + G V+ DL R G + K +
Sbjct: 187 AGETLRIPVPVGTVVKRKKGAVLADLAHPGDEVIVARGGQGGISLIDVPEYRRRKAMVLS 246
Query: 572 TEQAPDIAE----FGAAGETNIYHLEVRSLAHVGLLGFPNAGKSTVLRAISRARPNVAPY 739
D+++ G GE L +R +A VGL+G PNAGKST+L AI+ ARP++A Y
Sbjct: 247 PNIMRDVSDRVLIHGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLSAITLARPDIADY 306
Query: 740 PFTT 751
PFTT
Sbjct: 307 PFTT 310
>11_08_0079 +
28189782-28189907,28190445-28190553,28190876-28190958,
28191500-28191562,28191658-28192854,28193247-28193310,
28193338-28193426,28194404-28194463,28195442-28195547,
28196057-28196069,28196940-28197111
Length = 693
Score = 62.1 bits (144), Expect = 5e-10
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = +2
Query: 602 GAAGETNIYHLEVRSLAHVGLLGFPNAGKSTVLRAISRARPNVAPYPFTT 751
G G LE++S+A VGL+G PNAGKST+L A+SRARP +A Y FTT
Sbjct: 324 GHPGTETYLILELKSIADVGLVGMPNAGKSTLLSALSRARPEIADYAFTT 373
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/109 (29%), Positives = 48/109 (44%)
Frame = +2
Query: 155 KPKSTRDTVQHYVDSFRVRTVGGNGGDGCISFLSVWCKDHAXXXXXXXXXXXHVIFKATN 334
KPK+ + VD FR+R GG+GG+GCIS VI + +
Sbjct: 35 KPKTAPLQSRGMVDRFRLRAKGGDGGNGCISLRRSRSDRQGKPDGGNGGRGGDVILECSR 94
Query: 335 SVRSLNHCKAVIQAKPGEKGFNKDCSGKNAGHVIVNVPIGTIIKNQNGQ 481
SV + + ++A G G +K+ G I VP+GT+I G+
Sbjct: 95 SVWDFSGLQHHMKASRGANGVSKNQIGTRGSDKIAQVPVGTVIHLVEGE 143
>08_01_0387 -
3426058-3426168,3426279-3426473,3426612-3426724,
3427121-3427157,3427270-3427341,3427849-3427962,
3428129-3428200,3428343-3428381,3429340-3429414,
3429561-3429674,3429749-3429813,3429927-3430047,
3430942-3431063,3431547-3431634
Length = 445
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +2
Query: 662 LLGFPNAGKSTVLRAISRARPNVAPYPFTT 751
L+G PN GKS+++R +S +P V YPFTT
Sbjct: 249 LVGSPNVGKSSLVRILSSGKPEVCSYPFTT 278
>07_03_1353 -
25966332-25966421,25966477-25966528,25966612-25966803,
25966900-25967199,25967816-25967925,25968696-25968755,
25968835-25968906,25969172-25969348,25969845-25969898,
25970188-25970217,25970985-25971026
Length = 392
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +2
Query: 602 GAAGETNIYHLEVRSLAHVGLLGFPNAGKSTVLRAISRARPNVAPYPFTT 751
G AGE + + A VGL+GFP+ GKST+L ++ VA Y FTT
Sbjct: 62 GGAGEG--FDVTKSGDARVGLVGFPSVGKSTLLNKLTGTFSEVAAYEFTT 109
>07_01_0075 - 558829-560859
Length = 676
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 662 LLGFPNAGKSTVLRAISRARPNVAPYPFTT 751
+ G+PN GKS+ + I+RA +V PY FTT
Sbjct: 173 ICGYPNVGKSSFMNKITRADVDVQPYAFTT 202
>06_01_0668 - 4882174-4884204
Length = 676
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +2
Query: 662 LLGFPNAGKSTVLRAISRARPNVAPYPFTT 751
+ G+PN GKS+ + I+RA +V PY FTT
Sbjct: 173 ICGYPNVGKSSFMNKITRADVDVQPYAFTT 202
>05_03_0671 +
16831185-16831254,16832017-16832084,16832318-16832394,
16832910-16833090,16833192-16833248,16834182-16834256,
16834820-16834939,16835018-16835224
Length = 284
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +2
Query: 635 EVRSLAH--VGLLGFPNAGKSTVLRAISRARPNVAPYPFTT 751
EV H V L+GFP+ GKST+L ++ A Y FTT
Sbjct: 56 EVTKFGHGRVALIGFPSVGKSTLLTMLTGTHSEAASYEFTT 96
>01_04_0053 -
15444421-15444747,15444905-15445116,15445198-15445377,
15445572-15445836,15446308-15446522,15446611-15446784,
15446872-15447010,15447523-15447786
Length = 591
Score = 32.3 bits (70), Expect = 0.43
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 635 EVRSLAHVGLLGFPNAGKSTVLRAISRAR-PNVAPYPFTT 751
E++ VG++G PN GKS+++ ++ R+R NV P T
Sbjct: 264 ELKLAITVGIVGLPNVGKSSLINSLKRSRVVNVGSTPGVT 303
>03_02_1011 +
13198641-13198899,13199471-13199604,13199805-13199934,
13200290-13200450,13200587-13200688,13200786-13200890,
13200965-13201093,13201180-13201320,13201855-13201955,
13202300-13202357,13202656-13202943
Length = 535
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 656 VGLLGFPNAGKSTVLRAI-SRARPNVAPYPFTT 751
VG +G+PN GKS+V+ + S++ VAP P T
Sbjct: 319 VGFVGYPNVGKSSVINTLRSKSVCKVAPIPGET 351
>03_06_0179 -
32171712-32171780,32171861-32171920,32172096-32172166,
32172246-32172273,32172356-32172502,32172626-32172904,
32172949-32173011,32173137-32173247,32173605-32173658,
32173761-32173949,32174275-32174670
Length = 488
Score = 31.1 bits (67), Expect = 0.98
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 659 GLLGFPNAGKSTVLRAISRARPNVAPYPF 745
G++G PN GKST+ AI R P+ + F
Sbjct: 64 GIVGLPNVGKSTLFNAIVRNLPSASSEEF 92
>02_02_0136 + 7104633-7105247
Length = 204
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 568 GHRTGSGHSRVRGCRRNKHLPSGGTLT 648
GHR G S R CR HLP+ G+ T
Sbjct: 18 GHRRHRGSSSERSCRAPSHLPAPGSAT 44
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 545 YLPPHPAPQQTSTPPCPNPQS 483
Y PP P P T TP CP P S
Sbjct: 54 YYPPPPPPVVTPTPQCPPPPS 74
>07_01_0240 - 1749674-1750514,1751157-1752040
Length = 574
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1
Query: 719 ARAIWLSARCSSRHSGTPATRRGPVSVPP 633
A A S+RCS R S TPA+ GP PP
Sbjct: 532 AHAAASSSRCSGRCSTTPASSPGPPPPPP 560
>02_05_0544 +
29876337-29876524,29876850-29876882,29878390-29878577,
29879755-29879811,29879909-29880061,29880812-29881278,
29881477-29881635,29881718-29881834,29881966-29882117,
29883436-29883530,29883619-29884525,29884604-29884688,
29884775-29884843,29885045-29885224,29885367-29885495
Length = 992
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 562 PHGHRTGSGHSRVRGCRRNKHLPSG-GTLTGPRRVAGVPECREEHRAESHIAR 717
PHG HS +++H+ S GTLTGP + G P+ EH A+S I R
Sbjct: 601 PHG--AAFQHSHSYQDHKSEHMSSSPGTLTGPEFLWGSPKPYSEH-AQSPIWR 650
>06_03_1000 - 26778993-26779478
Length = 161
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 517 CCGAGWGGR*RKQIFPHGH 573
CCG G GGR R+ FP H
Sbjct: 111 CCGGGGGGRPRRPFFPVPH 129
>08_01_0078 - 551178-551897,552168-552197
Length = 249
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 445 TNRYNNKKPKWSSDWGFGQGGVDVCCGAGWGGR*RKQIFPHGH 573
TN + ++ WSS G G G VC G+ R + P GH
Sbjct: 159 TNVFQEERTSWSSRSGHGDGS-RVCSYGQVVGKGRSMVLPIGH 200
>07_01_0862 - 7172083-7172931
Length = 282
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Frame = -1
Query: 686 SRHSGTPATRRGPVSVPPDGK----CLFR--LQPRTLLCPEPVLCP*GKICFLYLPPHPA 525
SR PA P PP + LF L PR P+ P K LY PP P
Sbjct: 119 SRRCVAPAPPPPPPPPPPTAEEKKLLLFPPPLPPRKKAMLFPLPLPPRKKPLLYPPPLPP 178
Query: 524 PQQTSTPPCPNPQ 486
++ PP P PQ
Sbjct: 179 KKKPLPPPSPPPQ 191
>06_03_1055 -
27234824-27234838,27236087-27236125,27236322-27237388,
27237422-27237630,27237650-27238053
Length = 577
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 589 HSRVRGCRRNKHLPSGGTLTGPRRVAGVPECREEHRAESHIAR 717
H R R C+R + LP GG + RVA + + H A +AR
Sbjct: 157 HDRRRRCQRPRLLPDGGKIKAALRVAAL---KAAHPALDELAR 196
>05_01_0595 +
5344721-5345249,5349183-5349264,5349813-5350507,
5350583-5350839,5350934-5351615,5351689-5351892,
5351981-5352715,5352799-5353181
Length = 1188
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +1
Query: 562 PHGHRTGSGHSRVRGCRRNKHLPSGGTLTGP----RRVAGVPECREEHR 696
P HR G SR R + P GG + P R+ AG P CR HR
Sbjct: 35 PAVHRRAGGCSRAPV--RAEATPRGGGVGAPAHAFRQAAGAPPCRHPHR 81
>12_02_0263 - 16551831-16551909,16552668-16553173
Length = 194
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -1
Query: 575 LCP*GKICFLYLPPHPAPQQTSTPPCPNPQ 486
L P G I F PP P PQ PP P PQ
Sbjct: 72 LRPLGPIRFQQ-PPQPQPQPPQPPPQPQPQ 100
>09_04_0487 -
18014469-18014660,18014935-18015016,18015297-18015548,
18015634-18017789
Length = 893
Score = 28.7 bits (61), Expect = 5.2
Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = -1
Query: 725 WAARAIWLSARCSSRHSGTPATRRGPVSV-PPDGKCLFRLQPRTLLCPEPVLCP*GKICF 549
W R I LSA + S TP++ P PP+ PR P P+ P +
Sbjct: 451 WHRRDIILSAAVLAAGSSTPSSAAAPAPPSPPEPP-----SPRHPPSPPPLRSPPRQ--- 502
Query: 548 LYLPPHPAPQQTSTPPCPNPQ 486
P P P + PP P PQ
Sbjct: 503 ----PTPPPSPSQQPPLPAPQ 519
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 539 PPHPAPQQTSTPPCPNPQS 483
PP PAP PP P PQS
Sbjct: 36 PPPPAPDMPPPPPTPAPQS 54
>08_02_0450 -
17266977-17267165,17268017-17268053,17268139-17269514,
17285369-17286055,17286146-17286343
Length = 828
Score = 28.7 bits (61), Expect = 5.2
Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = -1
Query: 725 WAARAIWLSARCSSRHSGTPATRRGPVSV-PPDGKCLFRLQPRTLLCPEPVLCP*GKICF 549
W R I LSA + S TP++ P PP+ PR P P+ P +
Sbjct: 497 WHRRDIILSAAVLAAGSSTPSSAAAPAPPSPPEPP-----SPRHPPSPPPLRSPPRQ--- 548
Query: 548 LYLPPHPAPQQTSTPPCPNPQ 486
P P P + PP P PQ
Sbjct: 549 ----PTPPPSPSQQPPLPAPQ 565
>06_01_1169 +
9996068-9996265,9996356-9998589,9998675-9998926,
9999007-9999117,9999207-9999288,9999563-9999754
Length = 1022
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/65 (33%), Positives = 26/65 (40%)
Frame = -1
Query: 689 SSRHSGTPATRRGPVSVPPDGKCLFRLQPRTLLCPEPVLCP*GKICFLYLPPHPAPQQTS 510
S RH +P R P P + P L P+PV + PP P P QTS
Sbjct: 578 SPRHPPSPPPLRSPPRQPTPPPSPSQQPP--LPTPQPVQASPTSPTKQHAPPAPPPVQTS 635
Query: 509 TPPCP 495
PP P
Sbjct: 636 -PPTP 639
>05_04_0401 -
20982923-20983106,20983129-20983186,20983322-20983503,
20983637-20983752,20984148-20984234,20984334-20984477,
20984556-20984672,20984790-20984936,20985717-20985938,
20986919-20987072,20987583-20987632,20987870-20987921,
20987985-20988211
Length = 579
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 659 GLLGFPNAGKSTVL-RAISRARPNVAPYPFTT 751
G++G+PN GKS+++ R + R AP P T
Sbjct: 404 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVT 435
>05_03_0627 -
16342211-16342264,16342332-16342412,16342751-16342849,
16343660-16343770,16343964-16344116,16344741-16344881,
16345456-16345513,16345852-16345967,16346292-16346405,
16346496-16346557,16348788-16348930,16349030-16349097,
16349200-16349379,16349835-16350013,16350447-16350636,
16350920-16350978,16351421-16351574,16352133-16352158,
16352567-16353014
Length = 811
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 553 VSSTSRPTPRRNKHQPLPVQIPNHLTILVFYYCTYWY 443
V S+P R KH P P Q N YY Y Y
Sbjct: 653 VDDESKPERRPTKHMPTPEQWTNVFNPAFSYYAYYCY 689
>02_02_0096 -
6727844-6727957,6728149-6728247,6728332-6728410,
6728534-6728634,6728740-6728808,6729180-6729220,
6729992-6730836,6730924-6731027,6731479-6732354
Length = 775
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 613 RNKHLPSGGTLTGPRRVAGVPECREEHRAESHIARAAQ 726
R HL GG G AG P HR H +AQ
Sbjct: 6 RKLHLSGGGGSGGGAAAAGAPSGEHHHRPRQHRRSSAQ 43
>12_01_0927 +
9196230-9196427,9196499-9197190,9197317-9198351,
9198437-9198688,9198769-9198879,9198969-9199050,
9199325-9199516
Length = 853
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = -1
Query: 689 SSRHSGTPATRRGPVSVPPDGKCLFRLQPRTLLCPEPVLCP*GKICFLYLPPHPAPQQTS 510
S RH +P R P P + P L P+PV + + PP P QTS
Sbjct: 409 SPRHPPSPPPLRSPPRQPTPPPSPSQQPP--LPAPQPVQASPTSLAKQHAPPAPPSVQTS 466
Query: 509 TPPCP 495
PP P
Sbjct: 467 -PPTP 470
>11_01_0782 + 6543906-6544702,6545717-6547850
Length = 976
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 47 MRLIRLLQRLKVTIKTPNTVSKRPYCDNVPKPLRSLKPKSTRDTVQHYV-DSFRVRTVGG 223
+ + L +R +VTI V K PY N+ + L + +Q ++ ++ R++T+ G
Sbjct: 610 LETLDLRRRKEVTINLSTEVIKLPYLINLLGKFKLLNKAKRLNELQKFLSENCRLQTLAG 669
Query: 224 NGGDGCISF 250
DG F
Sbjct: 670 FSTDGSEGF 678
>09_02_0131 -
4693828-4694019,4694107-4694199,4694294-4694375,
4694465-4694575,4694656-4694907,4694993-4697196
Length = 977
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = -1
Query: 725 WAARAIWLSARCSSRHSGTPATRRGPVSVPPDGKCLFRL-QPRTLLCPEPVLCP*GKICF 549
W R I+LSA + S TP++ + + P PR P P+ P +
Sbjct: 451 WHRRDIFLSAAVLAAGSSTPSSSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQ--- 507
Query: 548 LYLPPHPAPQQTSTPPCPNPQ 486
P P P + PP P PQ
Sbjct: 508 ----PTPPPSPSQQPPLPTPQ 524
>07_03_1778 +
29451902-29452166,29452665-29452849,29453504-29453693,
29453990-29454168,29454263-29454314,29454426-29454553,
29454920-29455099,29455209-29455276,29455364-29455506,
29455682-29455743,29455874-29455987,29456180-29456320,
29456680-29456832,29456973-29457026,29457102-29457212,
29457339-29457512,29457600-29457680,29457788-29457886,
29457905-29458057
Length = 843
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 553 VSSTSRPTPRRNKHQPLPVQIPNHLTILVFYYCTYWY 443
V S+P R KH P P Q N YY Y Y
Sbjct: 576 VDDESKPERRPTKHMPTPEQWTNVFNPAYAYYVYYCY 612
>03_05_0491 -
24868261-24869383,24869482-24869561,24870193-24870249,
24870567-24870660,24871013-24871099,24871188-24871347,
24871440-24871674
Length = 611
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 656 VGLLGFPNAGKSTVLRA-ISRARPNVAPYPFTT 751
VG +G+PN GKS+ + A + + R V P T
Sbjct: 333 VGFVGYPNVGKSSTINALVGQKRTGVTSTPGKT 365
>02_02_0540 - 11334744-11334832,11335445-11335494,11335574-11336805
Length = 456
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 644 SLAHVGLLGFPNAGKSTVLR 703
S AHV +LG NAGKS L+
Sbjct: 344 SCAHVSILGIANAGKSAFLK 363
>10_07_0107 -
12936839-12937030,12937305-12937386,12937476-12937586,
12937667-12937918,12938004-12940237,12940328-12940525
Length = 1022
Score = 27.9 bits (59), Expect = 9.2
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = -1
Query: 725 WAARAIWLSARCSSRHSGTPATRRGPVSVPPDGKCLFRL-QPRTLLCPEPVLCP*GKICF 549
W R I LSA + S TP++ + + P PR L P P+ P +
Sbjct: 538 WHRRDIILSAAVLAAGSLTPSSSQAMTAAAPAPPSPPEPPSPRHLPSPPPLRSPPRQ--- 594
Query: 548 LYLPPHPAPQQTSTPPCPNPQ 486
P P P + PP P PQ
Sbjct: 595 ----PTPPPSPSQQPPLPTPQ 611
>03_06_0339 + 33246043-33247350
Length = 435
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 587 PEPVLCP*GKICFLYLPPHPAPQQTSTPPCPNPQSLDHFG 468
P P L + LPP A ++ ++PP P PQ D G
Sbjct: 2 PPPPLLLAAAVAAAALPPPAAARRHASPPPPQPQHPDKAG 41
>02_05_0449 -
29107310-29107377,29107732-29107777,29107860-29107934,
29108053-29108122,29108313-29108408,29108728-29108914,
29109001-29109169,29109614-29109646,29109731-29109841,
29110070-29111256,29112380-29112448,29114417-29114975,
29115455-29115589,29115714-29115896
Length = 995
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +2
Query: 311 HVIFKATNSVRSLNHCKAVIQAKPGEKGFN-----KDCSGKNAGHVIVNVPIGT 457
H+IFK + C+AV+ G+ N K CSG+ + + V VP+ +
Sbjct: 719 HIIFKGPPGSGKSSLCRAVVTEIFGDSSLNVSHYLKSCSGQGSTSMPVLVPLSS 772
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,088,794
Number of Sequences: 37544
Number of extensions: 523344
Number of successful extensions: 2679
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 2254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2628
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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