Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5k18
(756 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein prot... 36 0.21
U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein prot... 36 0.21
AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein ... 36 0.21
L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. 34 0.48
AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein. 34 0.48
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 33 1.5
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 33 1.5
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 33 1.5
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 32 2.6
BC035736-1|AAH35736.1| 282|Homo sapiens chromosome 12 open read... 31 3.4
AY358534-1|AAQ88898.1| 276|Homo sapiens ESRM828 protein. 31 3.4
AM156947-1|CAJ42307.1| 1221|Homo sapiens centrosome and spindle ... 31 3.4
AJ583433-1|CAE47426.1| 876|Homo sapiens centrosome spindle pole... 31 3.4
Y08267-1|CAA69593.1| 238|Homo sapiens AAD10 protein. 31 5.9
AJ488201-1|CAD32554.1| 2385|Homo sapiens steerin3 protein protein. 31 5.9
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 31 5.9
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 31 5.9
AB209494-1|BAD92731.1| 2704|Homo sapiens myeloid/lymphoid or mix... 31 5.9
U80756-1|AAB91448.1| 169|Homo sapiens polyglutamine rich protei... 30 7.8
BC017234-1|AAH17234.1| 517|Homo sapiens MBD2-interacting zinc f... 30 7.8
BC012856-1|AAH12856.1| 517|Homo sapiens MBD2-interacting zinc f... 30 7.8
BC001945-1|AAH01945.1| 517|Homo sapiens MBD2-interacting zinc f... 30 7.8
BC001073-1|AAH01073.1| 517|Homo sapiens MBD2-interacting zinc f... 30 7.8
>U85962-1|AAC51331.2| 2442|Homo sapiens CREB-binding protein protein.
Length = 2442
Score = 35.5 bits (78), Expect = 0.21
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +3
Query: 54 TPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIGPYNKSKE 233
TPP P P+ P+T + ++ QT PG VP T+ T ++ + V P +
Sbjct: 878 TPPQPAA-PTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQP 936
Query: 234 PTLDAGES 257
P++ +S
Sbjct: 937 PSVATPQS 944
>U47741-1|AAC51770.1| 2442|Homo sapiens CREB-binding protein protein.
Length = 2442
Score = 35.5 bits (78), Expect = 0.21
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +3
Query: 54 TPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIGPYNKSKE 233
TPP P P+ P+T + ++ QT PG VP T+ T ++ + V P +
Sbjct: 878 TPPQPAA-PTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQP 936
Query: 234 PTLDAGES 257
P++ +S
Sbjct: 937 PSVATPQS 944
>AB210043-1|BAE06125.1| 2472|Homo sapiens CREBBP variant protein
protein.
Length = 2472
Score = 35.5 bits (78), Expect = 0.21
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +3
Query: 54 TPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIGPYNKSKE 233
TPP P P+ P+T + ++ QT PG VP T+ T ++ + V P +
Sbjct: 908 TPPQPAA-PTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQP 966
Query: 234 PTLDAGES 257
P++ +S
Sbjct: 967 PSVATPQS 974
>L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.
Length = 1898
Score = 34.3 bits (75), Expect = 0.48
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +2
Query: 65 AAEVSL*SGNGHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRXVQQEQRTDAR 244
A E L S GH + +++ R R + R++ E QQQ + DR Q+E+ + R
Sbjct: 188 AEEEQLQSCKGHETEEFPDEEQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWR 247
Query: 245 RRRIYL 262
+R L
Sbjct: 248 KRETVL 253
>AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein.
Length = 1943
Score = 34.3 bits (75), Expect = 0.48
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +2
Query: 65 AAEVSL*SGNGHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRXVQQEQRTDAR 244
A E L S GH + +++ R R + R++ E QQQ + DR Q+E+ + R
Sbjct: 188 AEEEQLQSCKGHETEEFPDEEQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWR 247
Query: 245 RRRIYL 262
+R L
Sbjct: 248 KRETVL 253
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -1
Query: 666 TSPIPPPCTGRPS*VVWPPRPKRLYP 589
T+ PPP RPS V PP P R+YP
Sbjct: 319 TAAPPPPPPSRPSVAVPPPPPNRMYP 344
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -1
Query: 666 TSPIPPPCTGRPS*VVWPPRPKRLYP 589
T+ PPP RPS V PP P R+YP
Sbjct: 319 TAAPPPPPPSRPSVAVPPPPPNRMYP 344
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -1
Query: 666 TSPIPPPCTGRPS*VVWPPRPKRLYP 589
T+ PPP RPS V PP P R+YP
Sbjct: 319 TAAPPPPPPSRPSVAVPPPPPNRMYP 344
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -1
Query: 666 TSPIPPPCTGRPS*VVWPPRPKRLYP 589
T+ PPP RPS V PP P R+YP
Sbjct: 319 TAAPPPPPPSRPSVEVPPPPPNRMYP 344
>BC035736-1|AAH35736.1| 282|Homo sapiens chromosome 12 open reading
frame 53 protein.
Length = 282
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = -1
Query: 678 WECCTSPIPPPCTGRPS*VVWPPRPKRL-----YPTYQRHRCKIFARTPAANLAQTMPEI 514
W P+PPP G S PP P R P+ RH C ++ R P + + +P
Sbjct: 18 WPLLLLPLPPPAQGSSSSPRTPPAPARPPCARGGPSAPRHVC-VWERAPPPSRSPRVPRS 76
Query: 513 YSNRSAGTRP 484
GT P
Sbjct: 77 RRQVLPGTAP 86
>AY358534-1|AAQ88898.1| 276|Homo sapiens ESRM828 protein.
Length = 276
Score = 31.5 bits (68), Expect = 3.4
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = -1
Query: 678 WECCTSPIPPPCTGRPS*VVWPPRPKRL-----YPTYQRHRCKIFARTPAANLAQTMPEI 514
W P+PPP G S PP P R P+ RH C ++ R P + + +P
Sbjct: 18 WPLLLLPLPPPAQGSSSSPRTPPAPARPPCARGGPSAPRHVC-VWERAPPPSRSPRVPRS 76
Query: 513 YSNRSAGTRP 484
GT P
Sbjct: 77 RRQVLPGTAP 86
>AM156947-1|CAJ42307.1| 1221|Homo sapiens centrosome and spindle
pole associated protein 1 protein.
Length = 1221
Score = 31.5 bits (68), Expect = 3.4
Identities = 12/51 (23%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +2
Query: 107 QRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRXVQ--QEQRTDARRRR 253
+R +QRAR++ Y+ Q+ E +++ +L ++ ++ +E++ +A R++
Sbjct: 765 ERRLAEQRARIQQEYEEEQEKKREKEEEQRLKNEEHIRLAEERQKEAERKK 815
>AJ583433-1|CAE47426.1| 876|Homo sapiens centrosome spindle pole
associated protein protein.
Length = 876
Score = 31.5 bits (68), Expect = 3.4
Identities = 12/51 (23%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +2
Query: 107 QRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRXVQ--QEQRTDARRRR 253
+R +QRAR++ Y+ Q+ E +++ +L ++ ++ +E++ +A R++
Sbjct: 420 ERRLAEQRARIQQEYEEEQEKKREKEEEQRLKNEEHIRLAEERQKEAERKK 470
>Y08267-1|CAA69593.1| 238|Homo sapiens AAD10 protein.
Length = 238
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 107 QRANLQ-QRARVRAAYDARQQNGHEPQQQHKLGSDRXVQQEQR 232
Q LQ Q+ R++ A +QQ + QQQH LG QQ+Q+
Sbjct: 28 QERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQQ 70
>AJ488201-1|CAD32554.1| 2385|Homo sapiens steerin3 protein protein.
Length = 2385
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -1
Query: 675 ECCTSPIPPPCTGRPS*VVWPPRPKRLYPTYQRHRCKIFARTPA 544
+C ++ + P + S +VWPP+ ++ P +HR +I T A
Sbjct: 1752 DCGSASMKPSQSASASPLVWPPKKRQNGPVIYKHRSRICECTEA 1795
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 107 QRANLQ-QRARVRAAYDARQQNGHEPQQQHKLGSDRXVQQEQR 232
Q LQ Q+ R++ A +QQ + QQQH LG QQ+Q+
Sbjct: 3137 QERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQQ 3179
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 107 QRANLQ-QRARVRAAYDARQQNGHEPQQQHKLGSDRXVQQEQR 232
Q LQ Q+ R++ A +QQ + QQQH LG QQ+Q+
Sbjct: 3442 QERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQQ 3484
>AB209494-1|BAD92731.1| 2704|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia 2 variant protein.
Length = 2704
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 107 QRANLQ-QRARVRAAYDARQQNGHEPQQQHKLGSDRXVQQEQR 232
Q LQ Q+ R++ A +QQ + QQQH LG QQ+Q+
Sbjct: 884 QERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQQ 926
>U80756-1|AAB91448.1| 169|Homo sapiens polyglutamine rich protein
protein.
Length = 169
Score = 30.3 bits (65), Expect = 7.8
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 107 QRANLQ-QRARVRAAYDARQQNGHEPQQQHKLGSDRXVQQEQ 229
Q LQ Q+ R++ A +QQ + QQQH LG QQ+Q
Sbjct: 44 QERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQ 85
>BC017234-1|AAH17234.1| 517|Homo sapiens MBD2-interacting zinc
finger protein.
Length = 517
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 185 QQHKLGSDRXVQQEQRTDARRRRIYLVQQMCGFCS 289
QQH GS ++E+ D + Q CGFCS
Sbjct: 41 QQHLHGSGEEEEEEEEDDPLEEEFSCLWQECGFCS 75
>BC012856-1|AAH12856.1| 517|Homo sapiens MBD2-interacting zinc
finger protein.
Length = 517
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 185 QQHKLGSDRXVQQEQRTDARRRRIYLVQQMCGFCS 289
QQH GS ++E+ D + Q CGFCS
Sbjct: 41 QQHLHGSGEEEEEEEEDDPLEEEFSCLWQECGFCS 75
>BC001945-1|AAH01945.1| 517|Homo sapiens MBD2-interacting zinc
finger protein.
Length = 517
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 185 QQHKLGSDRXVQQEQRTDARRRRIYLVQQMCGFCS 289
QQH GS ++E+ D + Q CGFCS
Sbjct: 41 QQHLHGSGEEEEEEEEDDPLEEEFSCLWQECGFCS 75
>BC001073-1|AAH01073.1| 517|Homo sapiens MBD2-interacting zinc
finger protein.
Length = 517
Score = 30.3 bits (65), Expect = 7.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 185 QQHKLGSDRXVQQEQRTDARRRRIYLVQQMCGFCS 289
QQH GS ++E+ D + Q CGFCS
Sbjct: 41 QQHLHGSGEEEEEEEEDDPLEEEFSCLWQECGFCS 75
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,357,790
Number of Sequences: 237096
Number of extensions: 2493106
Number of successful extensions: 13168
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 11236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12498
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -