Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5k16
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   1.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   3.4  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.5  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   5.9  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   5.9  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
 Frame = +1

Query: 292 EIPENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLRNLSAVKLD--ICDSLMDQDIMT 465
           + P NI   +N   +     ++++ AS  +  S+  + N+ +  +    C +     + T
Sbjct: 631 DYPLNISWTLNGHFIDQTNGIVINRAS--KRVSTLSIDNVQSTHVGNYTCLASNSASVTT 688

Query: 466 PLTCYFHEHAESWIPDPISKSRDEDIDTFVQC 561
             T  F      WI +P  K+  +  D  V+C
Sbjct: 689 YTTSLFINVPPRWILEPTDKAFAQGSDAAVEC 720


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 98  QAKWVRFEKLRLVKSKTLWLAKRAMKKSNFQMIAKR 205
           Q KW  +E  R    +T W AKR  +   FQ+   R
Sbjct: 200 QKKWRGYEDFRRDFLRTYWSAKR-QRDIRFQIATGR 234


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 104 KWVRFEKLRLVKSKTLWL 157
           +WV F+  R +K+K  WL
Sbjct: 829 QWVGFDDERSLKTKMAWL 846


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 485 MNMQNHGYLIQFLNQEMKILIHLF 556
           + +QN   +I + NQ  +  IHLF
Sbjct: 114 VKLQNVSLIINYENQRTRSRIHLF 137


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 117 NLTHFACNLLINLFFNIYVVYHCRILSIAITFD 19
           + T++ CN  I L F+  +       S+ I FD
Sbjct: 151 SFTYYVCNTTIFLIFHSVLPIKRFFTSLGIAFD 183


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +1

Query: 541 IDTFVQCVNLLLNLC-ESSDLAVKYVGQSRILDILPRYLDMSLFGIDIVAAVLQCLFVVV 717
           +D   Q V L ++   E   + + +  +S    +LP  L + L   D++A VL  +F+VV
Sbjct: 113 LDERFQSVGLQIDTVREKRRIKIHFFLRSLFAIMLP--LGILLISQDVIANVLLFIFIVV 170

Query: 718 E 720
           +
Sbjct: 171 K 171


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 295 IPENIDEVINQGLVKVAAPLLLDPA 369
           I +N  ++ N GL KVAA    +PA
Sbjct: 68  ILDNATDITNGGLQKVAALKKTNPA 92


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 433 CDSLMDQDIMTPLTCYFHEHA 495
           C     Q+I+T L+C FH+ A
Sbjct: 71  CLDFTVQNILTFLSCRFHQGA 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,577
Number of Sequences: 336
Number of extensions: 3355
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)