Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5k16
         (738 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058346-1|AAL13575.1|  625|Drosophila melanogaster GH12023p pro...   113   3e-25
AE014297-451|AAF54129.1|  625|Drosophila melanogaster CG10286-PA...   113   3e-25
AL031366-2|CAA20516.1|  263|Drosophila melanogaster EG:100G7.5 p...    29   5.0  
AE014298-479|AAF45834.1|  263|Drosophila melanogaster CG14424-PA...    29   5.0  

>AY058346-1|AAL13575.1|  625|Drosophila melanogaster GH12023p
           protein.
          Length = 625

 Score =  113 bits (271), Expect = 3e-25
 Identities = 71/207 (34%), Positives = 104/207 (50%)
 Frame = +1

Query: 106 MGKVRKTKARKXXXXXXXXXXXXXXXXXXDSKENAVQTILDQLQGASVEEKYCGLQTLAM 285
           MGKVRK K R                   +     ++ I   LQ A+VEEK  GL + A+
Sbjct: 1   MGKVRKVKTRTPSGVDTSAEIDVESAGEAEGC-GPIEAICVHLQQANVEEKLNGLHSFAV 59

Query: 286 FIEIPENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLRNLSAVKLDICDSLMDQDIMT 465
                E + E+ +  LV++AAPLL D  S++RNA++G  RNLS    ++CD L++ DI+T
Sbjct: 60  LALRKEKVPEIRDSELVRIAAPLLCDKESAIRNAAAGAFRNLSVFGTEVCDFLVENDILT 119

Query: 466 PLTCYFHEHAESWIPDPISKSRDEDIDTFVQCVNLLLNLCESSDLAVKYVGQSRILDILP 645
            L         S+         +   DTF Q ++LL NLCESS  A + + Q+  L  L 
Sbjct: 120 ALLTL----VRSYDLTKGGFENELHADTFQQAIHLLRNLCESSPTATEALNQANFLSSLL 175

Query: 646 RYLDMSLFGIDIVAAVLQCLFVVVEDN 726
              D   FG+++  +V Q + VV E+N
Sbjct: 176 LGFDYRKFGLEVAISVAQLVLVVSENN 202


>AE014297-451|AAF54129.1|  625|Drosophila melanogaster CG10286-PA
           protein.
          Length = 625

 Score =  113 bits (271), Expect = 3e-25
 Identities = 71/207 (34%), Positives = 104/207 (50%)
 Frame = +1

Query: 106 MGKVRKTKARKXXXXXXXXXXXXXXXXXXDSKENAVQTILDQLQGASVEEKYCGLQTLAM 285
           MGKVRK K R                   +     ++ I   LQ A+VEEK  GL + A+
Sbjct: 1   MGKVRKVKTRTPSGVDTSAEIDVESAGEAEGC-GPIEAICVHLQQANVEEKLNGLHSFAV 59

Query: 286 FIEIPENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLRNLSAVKLDICDSLMDQDIMT 465
                E + E+ +  LV++AAPLL D  S++RNA++G  RNLS    ++CD L++ DI+T
Sbjct: 60  LALRKEKVPEIRDSELVRIAAPLLCDKESAIRNAAAGAFRNLSVFGTEVCDFLVENDILT 119

Query: 466 PLTCYFHEHAESWIPDPISKSRDEDIDTFVQCVNLLLNLCESSDLAVKYVGQSRILDILP 645
            L         S+         +   DTF Q ++LL NLCESS  A + + Q+  L  L 
Sbjct: 120 ALLTL----VRSYDLTKGGFENELHADTFQQAIHLLRNLCESSPTATEALNQANFLSSLL 175

Query: 646 RYLDMSLFGIDIVAAVLQCLFVVVEDN 726
              D   FG+++  +V Q + VV E+N
Sbjct: 176 LGFDYRKFGLEVAISVAQLVLVVSENN 202


>AL031366-2|CAA20516.1|  263|Drosophila melanogaster EG:100G7.5
           protein.
          Length = 263

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +1

Query: 289 IEIPENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLRN 408
           +E PEN ++ +  G   VAAP+ + PA+  R ++  +LR+
Sbjct: 172 LEQPENDEDQLLDGAAPVAAPVAVAPAALRRLSADELLRS 211


>AE014298-479|AAF45834.1|  263|Drosophila melanogaster CG14424-PA
           protein.
          Length = 263

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +1

Query: 289 IEIPENIDEVINQGLVKVAAPLLLDPASSVRNASSGMLRN 408
           +E PEN ++ +  G   VAAP+ + PA+  R ++  +LR+
Sbjct: 172 LEQPENDEDQLLDGAAPVAAPVAVAPAALRRLSADELLRS 211


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,023,082
Number of Sequences: 53049
Number of extensions: 587693
Number of successful extensions: 1743
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)