BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5k10
(769 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein. 28 0.37
DQ437579-1|ABD96049.1| 575|Anopheles gambiae short neuropeptide... 24 4.5
>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
Length = 1231
Score = 27.9 bits (59), Expect = 0.37
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +2
Query: 389 HLENVKFYGFDMDYTLAEYKSPQYETLGFNLTKERLVVKGYPREILEFEYDPSFPVRGL 565
H +V++ + +D +AEY PQY+ F +T R G R + +F++ ++P +G+
Sbjct: 1079 HERSVRYQCYVVD-PIAEYNMPQYKLREFKVTDAR---DGSSRTVRQFQF-ITWPEQGV 1132
>DQ437579-1|ABD96049.1| 575|Anopheles gambiae short neuropeptide F
receptor protein.
Length = 575
Score = 24.2 bits (50), Expect = 4.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 569 FDTLYGNLLKVDAYGNILVC 628
F LY ++ + +GN+LVC
Sbjct: 98 FCVLYSSIFVLGVFGNVLVC 117
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,026
Number of Sequences: 2352
Number of extensions: 17558
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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