Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5k05
         (668 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y07759-2|CAA69036.1| 1828|Homo sapiens mysoin heavy chain 12 pro...    32   2.1  
Y07759-1|CAA69035.1| 1855|Homo sapiens mysoin heavy chain 12 pro...    32   2.1  
U90942-1|AAD00702.1| 1855|Homo sapiens myosin heavy chain 12 pro...    32   2.1  
EF119711-1|ABO69251.1| 3327|Homo sapiens beta-xin protein.             30   8.6  
AY820969-1|AAV87913.1| 3345|Homo sapiens CMYA3 protein.                30   8.6  
AL832331-1|CAD38624.1| 1946|Homo sapiens hypothetical protein pr...    30   8.6  
AK096430-1|BAC04787.1|  756|Homo sapiens protein ( Homo sapiens ...    30   8.6  
AJ626901-1|CAF25193.1| 1020|Homo sapiens XIRP2 protein.                30   8.6  

>Y07759-2|CAA69036.1| 1828|Homo sapiens mysoin heavy chain 12
           protein.
          Length = 1828

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 19/83 (22%), Positives = 43/83 (51%)
 Frame = -1

Query: 494 FNYIRDDINLEECITVPKYKHIVNVNLKSLRVFEDNNFDKNDVDLSDTRSRKPRIVPIIS 315
           FN+I D++N      V ++  I  +++     FE N+F++  ++ ++ + ++   + +  
Sbjct: 412 FNWIVDNVNQALHSAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFK 471

Query: 314 ASSENADYIQTQINLGLIAIYEN 246
              E  +Y++ QI   LI  Y+N
Sbjct: 472 LEQE--EYMKEQIPWTLIDFYDN 492


>Y07759-1|CAA69035.1| 1855|Homo sapiens mysoin heavy chain 12
           protein.
          Length = 1855

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 19/83 (22%), Positives = 43/83 (51%)
 Frame = -1

Query: 494 FNYIRDDINLEECITVPKYKHIVNVNLKSLRVFEDNNFDKNDVDLSDTRSRKPRIVPIIS 315
           FN+I D++N      V ++  I  +++     FE N+F++  ++ ++ + ++   + +  
Sbjct: 412 FNWIVDNVNQALHSAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFK 471

Query: 314 ASSENADYIQTQINLGLIAIYEN 246
              E  +Y++ QI   LI  Y+N
Sbjct: 472 LEQE--EYMKEQIPWTLIDFYDN 492


>U90942-1|AAD00702.1| 1855|Homo sapiens myosin heavy chain 12
           protein.
          Length = 1855

 Score = 31.9 bits (69), Expect = 2.1
 Identities = 19/83 (22%), Positives = 43/83 (51%)
 Frame = -1

Query: 494 FNYIRDDINLEECITVPKYKHIVNVNLKSLRVFEDNNFDKNDVDLSDTRSRKPRIVPIIS 315
           FN+I D++N      V ++  I  +++     FE N+F++  ++ ++ + ++   + +  
Sbjct: 412 FNWIVDNVNQALHSAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFK 471

Query: 314 ASSENADYIQTQINLGLIAIYEN 246
              E  +Y++ QI   LI  Y+N
Sbjct: 472 LEQE--EYMKEQIPWTLIDFYDN 492


>EF119711-1|ABO69251.1| 3327|Homo sapiens beta-xin protein.
          Length = 3327

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 479  DDINLEECITVPKYKHIVNVNLKSLR-VFEDNNFDKND 369
            D I+ E    +P   HI   N+K+ R  FE  NFDKN+
Sbjct: 1175 DQISEESHNIMPSIDHIQGGNVKTSRQFFESENFDKNN 1212


>AY820969-1|AAV87913.1| 3345|Homo sapiens CMYA3 protein.
          Length = 3345

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 479  DDINLEECITVPKYKHIVNVNLKSLR-VFEDNNFDKND 369
            D I+ E    +P   HI   N+K+ R  FE  NFDKN+
Sbjct: 1222 DQISEESHNIMPSIDHIQGGNVKTSRQFFESENFDKNN 1259


>AL832331-1|CAD38624.1| 1946|Homo sapiens hypothetical protein
           protein.
          Length = 1946

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 479 DDINLEECITVPKYKHIVNVNLKSLR-VFEDNNFDKND 369
           D I+ E    +P   HI   N+K+ R  FE  NFDKN+
Sbjct: 784 DQISEESHNIMPSIDHIQGGNVKTSRQFFESENFDKNN 821


>AK096430-1|BAC04787.1|  756|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39111 fis, clone NTONG2005265, weakly similar to
           Gallus gallus Xin mRNA. ).
          Length = 756

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 479 DDINLEECITVPKYKHIVNVNLKSLR-VFEDNNFDKND 369
           D I+ E    +P   HI   N+K+ R  FE  NFDKN+
Sbjct: 295 DQISEESHNIMPSIDHIQGGNVKTSRQFFESENFDKNN 332


>AJ626901-1|CAF25193.1| 1020|Homo sapiens XIRP2 protein.
          Length = 1020

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 479 DDINLEECITVPKYKHIVNVNLKSLR-VFEDNNFDKND 369
           D I+ E    +P   HI   N+K+ R  FE  NFDKN+
Sbjct: 862 DQISEESHNIMPSIDHIQGGNVKTSRQFFESENFDKNN 899


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,011,823
Number of Sequences: 237096
Number of extensions: 1933885
Number of successful extensions: 4839
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4839
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)