Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5k05
(668 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT016083-1|AAV36968.1| 856|Drosophila melanogaster LD44383p pro... 31 1.4
BT001469-1|AAN71224.1| 1075|Drosophila melanogaster LD02622p pro... 31 1.4
AE013599-11|EAA46158.1| 856|Drosophila melanogaster CG17665-PB,... 31 1.4
AE013599-10|EAA46157.1| 1068|Drosophila melanogaster CG17665-PA,... 31 1.4
U42403-1|AAB02355.1| 1180|Drosophila melanogaster stripe a prote... 31 1.9
U42402-1|AAB02354.1| 906|Drosophila melanogaster stripe b prote... 31 1.9
AY113649-1|AAM29654.1| 701|Drosophila melanogaster SD12335p pro... 30 3.3
AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA... 30 3.3
AE014297-2438|AAN13756.1| 906|Drosophila melanogaster CG7847-PB... 29 7.6
AE014297-2437|AAF55492.1| 1186|Drosophila melanogaster CG7847-PA... 29 7.6
>BT016083-1|AAV36968.1| 856|Drosophila melanogaster LD44383p
protein.
Length = 856
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 419 NLKSLRVFEDNNFDKNDVDLSDTRSRKPRIVPIISASSENADYIQTQIN 273
NL+ + EDN D +D+ LS+ R ++ V + A +E+ D T+ N
Sbjct: 338 NLRRVHNIEDNTDDDDDLPLSEVRLKEKPKVELAEAIAESFDAFVTKRN 386
>BT001469-1|AAN71224.1| 1075|Drosophila melanogaster LD02622p
protein.
Length = 1075
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 419 NLKSLRVFEDNNFDKNDVDLSDTRSRKPRIVPIISASSENADYIQTQIN 273
NL+ + EDN D +D+ LS+ R ++ V + A +E+ D T+ N
Sbjct: 550 NLRRVHNIEDNTDDDDDLPLSEVRLKEKPKVELAEAIAESFDAFVTKRN 598
>AE013599-11|EAA46158.1| 856|Drosophila melanogaster CG17665-PB,
isoform B protein.
Length = 856
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 419 NLKSLRVFEDNNFDKNDVDLSDTRSRKPRIVPIISASSENADYIQTQIN 273
NL+ + EDN D +D+ LS+ R ++ V + A +E+ D T+ N
Sbjct: 338 NLRRVHNIEDNTDDDDDLPLSEVRLKEKPKVELAEAIAESFDAFVTKRN 386
>AE013599-10|EAA46157.1| 1068|Drosophila melanogaster CG17665-PA,
isoform A protein.
Length = 1068
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 419 NLKSLRVFEDNNFDKNDVDLSDTRSRKPRIVPIISASSENADYIQTQIN 273
NL+ + EDN D +D+ LS+ R ++ V + A +E+ D T+ N
Sbjct: 550 NLRRVHNIEDNTDDDDDLPLSEVRLKEKPKVELAEAIAESFDAFVTKRN 598
>U42403-1|AAB02355.1| 1180|Drosophila melanogaster stripe a protein
protein.
Length = 1180
Score = 30.7 bits (66), Expect = 1.9
Identities = 27/116 (23%), Positives = 53/116 (45%)
Frame = -3
Query: 666 QRRAQPAHESRSAANAVCKWKNQV*RVSRRFVYTQNGRRYCGYVQS*W*AGQFG*KFFQL 487
Q++ Q H + S++N+ C +Q + ++ + + ++ Q QFG +
Sbjct: 584 QQQQQLQHNNTSSSNSNCHHSHQQQQQQQQQQHMSSPQQQYQQHQILHQQQQFG---YHH 640
Query: 486 H*GRH*FGRMHYGAQIQAYCQRQPQKPQSVRRQQF*QKRRGLERHAFQKTAHRTHY 319
H H H+ +Q+Q Q+Q Q+ Q + QQ ++ +H Q+ H+ HY
Sbjct: 641 HHHHH---HHHHHSQLQQLQQQQQQQQQQQQHQQQPLHQQQQLQHQQQQQHHQQHY 693
>U42402-1|AAB02354.1| 906|Drosophila melanogaster stripe b protein
protein.
Length = 906
Score = 30.7 bits (66), Expect = 1.9
Identities = 27/116 (23%), Positives = 53/116 (45%)
Frame = -3
Query: 666 QRRAQPAHESRSAANAVCKWKNQV*RVSRRFVYTQNGRRYCGYVQS*W*AGQFG*KFFQL 487
Q++ Q H + S++N+ C +Q + ++ + + ++ Q QFG +
Sbjct: 310 QQQQQLQHNNTSSSNSNCHHSHQQQQQQQQQQHMSSPQQQYQQHQILHQQQQFG---YHH 366
Query: 486 H*GRH*FGRMHYGAQIQAYCQRQPQKPQSVRRQQF*QKRRGLERHAFQKTAHRTHY 319
H H H+ +Q+Q Q+Q Q+ Q + QQ ++ +H Q+ H+ HY
Sbjct: 367 HHHHH---HHHHHSQLQQLQQQQQQQQQQQQHQQQPLHQQQQLQHQQQQQHHQQHY 419
>AY113649-1|AAM29654.1| 701|Drosophila melanogaster SD12335p
protein.
Length = 701
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -1
Query: 479 DDINLEECITVPKYKHIVNVNLKSLRVFEDNNFDKNDVDLSDTRSRKPRIVPIISAS 309
D + +EC P+ + + ++ FED+N D++D+DL T KP V I+A+
Sbjct: 167 DSESEQECEANPEPETQTRKKNRIIKAFEDDNSDEDDLDLLQT--PKPSNVAPITAT 221
>AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA
protein.
Length = 1465
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -1
Query: 479 DDINLEECITVPKYKHIVNVNLKSLRVFEDNNFDKNDVDLSDTRSRKPRIVPIISAS 309
D + +EC P+ + + ++ FED+N D++D+DL T KP V I+A+
Sbjct: 931 DSESEQECEANPEPETQTRKKNRIIKAFEDDNSDEDDLDLLQT--PKPSNVAPITAT 985
>AE014297-2438|AAN13756.1| 906|Drosophila melanogaster CG7847-PB,
isoform B protein.
Length = 906
Score = 28.7 bits (61), Expect = 7.6
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -3
Query: 456 HYGAQIQAYCQRQPQKPQSVRRQQF*QKRRGLERHAFQKTAHRTHY 319
H+ +Q+Q Q+Q Q+ Q + QQ ++ +H Q+ H+ HY
Sbjct: 374 HHHSQLQQLQQQQQQQQQQQQHQQQPLHQQQQLQHQQQQQHHQQHY 419
>AE014297-2437|AAF55492.1| 1186|Drosophila melanogaster CG7847-PA,
isoform A protein.
Length = 1186
Score = 28.7 bits (61), Expect = 7.6
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -3
Query: 456 HYGAQIQAYCQRQPQKPQSVRRQQF*QKRRGLERHAFQKTAHRTHY 319
H+ +Q+Q Q+Q Q+ Q + QQ ++ +H Q+ H+ HY
Sbjct: 654 HHHSQLQQLQQQQQQQQQQQQHQQQPLHQQQQLQHQQQQQHHQQHY 699
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,254,874
Number of Sequences: 53049
Number of extensions: 621484
Number of successful extensions: 1863
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1863
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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