Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5k05
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016688-7|AAB66080.1| 726|Caenorhabditis elegans Hypothetical ... 31 0.74
Z93393-17|CAB07693.2| 751|Caenorhabditis elegans Hypothetical p... 30 1.7
Z69902-1|CAA93767.1| 689|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81069-8|CAB02996.2| 600|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL021448-4|CAA16278.2| 600|Caenorhabditis elegans Hypothetical ... 29 3.9
Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical pr... 28 6.9
AL132949-8|CAB61079.1| 471|Caenorhabditis elegans Hypothetical ... 28 6.9
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 28 6.9
AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocar... 28 6.9
Z83216-2|CAB05673.1| 315|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 27 9.1
U29537-7|AAO38649.1| 239|Caenorhabditis elegans Egg laying defe... 27 9.1
U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12 transcrip... 27 9.1
AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical ... 27 9.1
AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical ... 27 9.1
AF283982-1|AAG13397.1| 471|Caenorhabditis elegans transcription... 27 9.1
AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 ho... 27 9.1
AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 ho... 27 9.1
AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical ... 27 9.1
>AF016688-7|AAB66080.1| 726|Caenorhabditis elegans Hypothetical
protein F18A12.1 protein.
Length = 726
Score = 31.1 bits (67), Expect = 0.74
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Frame = -1
Query: 410 SLRVFEDNNFDKNDVDLSDTRSRKPRIVPIISASSENADYIQTQINLGLIAIYENMVKVL 231
SLRVF N+F+K ++ + D + + + I E+ ++ I E M K++
Sbjct: 404 SLRVFVRNHFEKGNLKIVDEMAEETK-KSFIEMLQEST-WLGADSKKNAILKLEKMGKMI 461
Query: 230 ATHEQANDPNLLQQYFEKSKFKNFDFLIYVLWKI----LTKNENFSYRETDIKLFLELLC 63
++ L + FE K D L +L KI + + F ET + L +L
Sbjct: 462 GYPKEFEKKGALDKMFETLKLLPKDTLYGILKKIGRFHMEQGIEFVALETPMDPVLPVLM 521
Query: 62 ESLFACDKEILN 27
+ F D+ L+
Sbjct: 522 TNAFYTDRNHLS 533
>Z93393-17|CAB07693.2| 751|Caenorhabditis elegans Hypothetical
protein Y48E1B.7 protein.
Length = 751
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -1
Query: 179 KSKFKNFDFLIYVLWKILTKNENFSYRE 96
K K KN FL ++ KI KNE F Y E
Sbjct: 427 KKKIKNLAFLRLLVKKIFAKNERFKYCE 454
>Z69902-1|CAA93767.1| 689|Caenorhabditis elegans Hypothetical
protein C47D12.2 protein.
Length = 689
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/85 (21%), Positives = 34/85 (40%)
Frame = -1
Query: 332 IVPIISASSENADYIQTQINLGLIAIYENMVKVLATHEQANDPNLLQQYFEKSKFKNFDF 153
I +IS S ++ ++ I E + T A P L +Y E DF
Sbjct: 601 IAAVISHFSSKVIHVPAGDGSTMLQIIEKEANIWPTDRLAKFPELKFRYVEDEY--TVDF 658
Query: 152 LIYVLWKILTKNENFSYRETDIKLF 78
+ +W++ ++ + + IK+F
Sbjct: 659 FVPYVWRLSVQHSGIYFETSRIKIF 683
>Z81069-8|CAB02996.2| 600|Caenorhabditis elegans Hypothetical
protein Y2H9A.4 protein.
Length = 600
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 497 FFNYIRDDINLEECITVPKYKHIVN 423
FFN +RDD+ +EE + +Y I+N
Sbjct: 24 FFNLVRDDLPIEETQVIREYDLILN 48
>Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical
protein F56D5.9 protein.
Length = 1132
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -1
Query: 617 FVNGKTKFDESHEDLFILKMADGTVVTCKVNGELVNSDKNFFNYIRDDI 471
+ N KF+E H D+ IL V VNGE V S + I ++
Sbjct: 179 YKNVVKKFNERHSDISILDDIIDAVQEFTVNGEFVKSSASLLRTISQNL 227
>AL021448-4|CAA16278.2| 600|Caenorhabditis elegans Hypothetical
protein Y2H9A.4 protein.
Length = 600
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 497 FFNYIRDDINLEECITVPKYKHIVN 423
FFN +RDD+ +EE + +Y I+N
Sbjct: 24 FFNLVRDDLPIEETQVIREYDLILN 48
>Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical
protein C41G7.5b protein.
Length = 560
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = -1
Query: 593 DESHEDLFILKMADGTVVTCKVNGELVNSDKNFFNYIRDDINLEECITVPKYKHIVNVNL 414
+ES+ + LK G ++ NGE+ + +N NY+ + + + P Y I + +
Sbjct: 83 EESNFEEISLKSLGGFILVLNDNGEIYYASENVENYL--GFHQSDVLHQPVYDLIHSEDR 140
Query: 413 KSLRVFEDNNF 381
+R D+NF
Sbjct: 141 DDIRQQLDSNF 151
>Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical
protein C41G7.5a protein.
Length = 602
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = -1
Query: 593 DESHEDLFILKMADGTVVTCKVNGELVNSDKNFFNYIRDDINLEECITVPKYKHIVNVNL 414
+ES+ + LK G ++ NGE+ + +N NY+ + + + P Y I + +
Sbjct: 125 EESNFEEISLKSLGGFILVLNDNGEIYYASENVENYL--GFHQSDVLHQPVYDLIHSEDR 182
Query: 413 KSLRVFEDNNF 381
+R D+NF
Sbjct: 183 DDIRQQLDSNF 193
>AL132949-8|CAB61079.1| 471|Caenorhabditis elegans Hypothetical
protein Y53F4B.10 protein.
Length = 471
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/61 (19%), Positives = 29/61 (47%)
Frame = -1
Query: 572 FILKMADGTVVTCKVNGELVNSDKNFFNYIRDDINLEECITVPKYKHIVNVNLKSLRVFE 393
F+ + ++ K+ +++ F +Y D N+E+ P + ++N NL ++ F
Sbjct: 53 FVPNNLESKTISAKLKDPILSDRHPFEDYYHDQQNVEQNSENPVKRLLLNTNLDDIQAFR 112
Query: 392 D 390
+
Sbjct: 113 N 113
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -1
Query: 227 THEQANDPNLLQQYFEKSKFKNFDFLIYVLWKILTKNENFSYR---ETDIKLFLELLCES 57
T Q L+Q ++ K + F L+ V+W +L K + YR + +++ L LL
Sbjct: 802 TERQEKFSTLVQYKIQQPK-QGFSKLMMVVWALLQKRAYYLYRNPVQITLQIILPLLTLW 860
Query: 56 LFA 48
LFA
Sbjct: 861 LFA 863
>AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocarbon
receptor orthologAHR-1 protein.
Length = 602
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = -1
Query: 593 DESHEDLFILKMADGTVVTCKVNGELVNSDKNFFNYIRDDINLEECITVPKYKHIVNVNL 414
+ES+ + LK G ++ NGE+ + +N NY+ + + + P Y I + +
Sbjct: 125 EESNFEEISLKSLGGFILVLNDNGEIYYASENVENYL--GFHQSDVLHQPVYDLIHSEDR 182
Query: 413 KSLRVFEDNNF 381
+R D+NF
Sbjct: 183 DDIRQQLDSNF 193
>Z83216-2|CAB05673.1| 315|Caenorhabditis elegans Hypothetical
protein C08F11.2 protein.
Length = 315
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +3
Query: 204 WIVGLFVGRQNFNHVLVNCYKPQIDLRLNVVCIFAARRYN----GYDARFS 344
WIVG+++ +F + +NC CI +R+ GY A FS
Sbjct: 149 WIVGIYISTFHFGWIEINCRATNCKKENLAECICESRKKEFLLFGYTAIFS 199
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 27.5 bits (58), Expect = 9.1
Identities = 25/87 (28%), Positives = 41/87 (47%)
Frame = -1
Query: 467 LEECITVPKYKHIVNVNLKSLRVFEDNNFDKNDVDLSDTRSRKPRIVPIISASSENADYI 288
L +TVP + N+N +L F + NF + L + R R+P + P + S+ +
Sbjct: 772 LTHYLTVPMKNFLSNMNSITLEQFAEENFKGH---LLEPR-REPIMTPFLHKESDYDFRL 827
Query: 287 QTQINLGLIAIYENMVKVLATHEQAND 207
+I LI Y N +K+ T +Q D
Sbjct: 828 SVEI-FKLILKYMNDIKL--TKKQRED 851
>U29537-7|AAO38649.1| 239|Caenorhabditis elegans Egg laying
defective protein 44,isoform e protein.
Length = 239
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = -1
Query: 455 ITVPKYKHIVNVNLKSLR---VFEDNNFDKNDVDLSDTRSRKPRIVPIISASSENAD 294
+T+ + V N SLR V +N +K+D+D+S + P+++ + SE D
Sbjct: 36 LTLHSFSAYVKCNKTSLRTELVKIENTLEKDDIDISVFYEKYPKLLRELFEKSEKKD 92
>U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12
transcriptional activator protein.
Length = 515
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 447 AQIQAYCQRQPQKPQSVRRQQF 382
AQ QA Q+Q Q+PQ +RQ+F
Sbjct: 241 AQAQAQWQQQEQQPQEQQRQRF 262
>AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical
protein Y79H2A.1b protein.
Length = 466
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 447 AQIQAYCQRQPQKPQSVRRQQF 382
AQ QA Q+Q Q+PQ +RQ+F
Sbjct: 192 AQAQAQWQQQEQQPQEQQRQRF 213
>AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical
protein Y79H2A.1a protein.
Length = 552
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 447 AQIQAYCQRQPQKPQSVRRQQF 382
AQ QA Q+Q Q+PQ +RQ+F
Sbjct: 278 AQAQAQWQQQEQQPQEQQRQRF 299
>AF283982-1|AAG13397.1| 471|Caenorhabditis elegans transcription
enhancer factor-1-like protein EGL-44 protein.
Length = 471
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = -1
Query: 455 ITVPKYKHIVNVNLKSLR---VFEDNNFDKNDVDLSDTRSRKPRIVPIISASSENAD 294
+T+ + V N SLR V +N +K+D+D+S + P+++ + SE D
Sbjct: 268 LTLHSFSAYVKCNKTSLRTELVKIENTLEKDDIDISVFYEKYPKLLRELFEKSEKKD 324
>AF003145-6|AAK68678.1| 1420|Caenorhabditis elegans Mtk1/mekk4 homolog
protein 1, isoformb protein.
Length = 1420
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = -1
Query: 356 DTRSRKPRIVPIISASSENADYIQTQINLGLIAIYENMVKVLATHEQANDPNLLQQY 186
D S + ++ EN I+++IN+ I+EN+VK + +D + +Y
Sbjct: 1144 DIDSHRVIAAKVMRIQRENHKAIESEINIFRQLIHENLVKYYGVQVEDSDVIIFMEY 1200
>AF003145-5|AAB57718.1| 1418|Caenorhabditis elegans Mtk1/mekk4 homolog
protein 1, isoforma protein.
Length = 1418
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = -1
Query: 356 DTRSRKPRIVPIISASSENADYIQTQINLGLIAIYENMVKVLATHEQANDPNLLQQY 186
D S + ++ EN I+++IN+ I+EN+VK + +D + +Y
Sbjct: 1144 DIDSHRVIAAKVMRIQRENHKAIESEINIFRQLIHENLVKYYGVQVEDSDVIIFMEY 1200
>AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical
protein C51G7.4 protein.
Length = 579
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 447 AQIQAYCQRQPQKPQSVRRQQF 382
AQ QA Q+Q Q+PQ +RQ+F
Sbjct: 305 AQAQAQWQQQEQQPQEQQRQRF 326
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,494,709
Number of Sequences: 27780
Number of extensions: 341203
Number of successful extensions: 1204
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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