Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5j18
         (115 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   2.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   2.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    19   4.7  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    18   8.2  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 113 FFLILNDKVIYLQNSNKNKLFE 48
           F LIL   ++Y  +  KN LF+
Sbjct: 48  FHLILFAVLLYFASLEKNPLFD 69


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 53  IVYFYYCFV 79
           I YFYY F+
Sbjct: 238 IYYFYYAFI 246



 Score = 19.4 bits (38), Expect = 3.5
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 53  IVYFYYCFV 79
           + YFYY F+
Sbjct: 113 VYYFYYAFI 121



 Score = 18.6 bits (36), Expect = 6.2
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +2

Query: 59  YFYYCFV 79
           YFYY F+
Sbjct: 102 YFYYAFI 108


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
          beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 50 ELSGLSLKSCR 18
          E +GLSL +CR
Sbjct: 44 EATGLSLPACR 54


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +2

Query: 53  IVYFYYCF 76
           I  FYYC+
Sbjct: 248 ITQFYYCY 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,010
Number of Sequences: 336
Number of extensions: 235
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 18
effective length of database: 116,537
effective search space used:  2214203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)