Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5j08
         (557 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.25 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.4  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   4.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   5.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   5.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = -2

Query: 526 YSLFQFLIHLQLL---YKYIFYDKFFFCNIIPFGLSLLF 419
           Y+   F +HL LL   Y + +    F C  I F + LLF
Sbjct: 243 YAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLF 281


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 481 YIFYDKFFFCNIIPFGLSL 425
           Y FY  F  C ++ +G +L
Sbjct: 104 YRFYGGFLLCKVVKYGQTL 122


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 158 VVLHYLRKIGASQEV 202
           VVL Y  ++GA+QE+
Sbjct: 142 VVLDYFERLGANQEL 156


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 127 SKFYFLLNYSFFDFIVYLY 71
           S+F  L  YS+F ++ Y+Y
Sbjct: 77  SRFLCLPFYSYFFYLSYIY 95


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 127 SKFYFLLNYSFFDFIVYLY 71
           S+F  L  YS+F ++ Y+Y
Sbjct: 33  SRFLCLPFYSYFFYLSYIY 51


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 426 RLKPKGMMLQKKNL 467
           RL P G+ L+KKN+
Sbjct: 301 RLGPAGVHLRKKNI 314


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 130 FSKFYFLLNYSFFDFI 83
           F K  FL+ Y  FD++
Sbjct: 781 FVKCVFLMGYQIFDWV 796


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,603
Number of Sequences: 336
Number of extensions: 1850
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)