Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5j07
(702 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457385-1|CAG33666.1| 93|Homo sapiens HIG1 protein. 68 4e-11
BC070277-1|AAH70277.1| 93|Homo sapiens HIG1 domain family, mem... 68 4e-11
BC009594-1|AAH09594.1| 93|Homo sapiens HIG1 domain family, mem... 68 4e-11
BC009583-1|AAH09583.1| 93|Homo sapiens HIG1 domain family, mem... 68 4e-11
BC000601-1|AAH00601.1| 93|Homo sapiens HIG1 domain family, mem... 68 4e-11
AF145385-1|AAD33954.1| 93|Homo sapiens hypoxia-inducbile gene ... 68 4e-11
BC020667-1|AAH20667.1| 99|Homo sapiens HIG1 domain family, mem... 52 2e-06
AB038022-1|BAA90726.1| 99|Homo sapiens CLST 11240 protein prot... 52 2e-06
AB038021-1|BAA90725.1| 99|Homo sapiens CLST 11240 protein prot... 52 2e-06
BC007502-1|AAH07502.1| 106|Homo sapiens HIG1 domain family, mem... 52 3e-06
BC000587-1|AAH00587.1| 106|Homo sapiens Unknown (protein for MG... 52 3e-06
BC040890-1|AAH40890.1| 106|Homo sapiens HIGD2BP protein protein. 39 0.015
>CR457385-1|CAG33666.1| 93|Homo sapiens HIG1 protein.
Length = 93
Score = 67.7 bits (158), Expect = 4e-11
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +2
Query: 158 EESQSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQLRVAAQGTVV 337
EE Q +L RK+K++PF+ YG Y K RG S+ L+ +RVAAQG VV
Sbjct: 13 EEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVV 72
Query: 338 SALTIGLAYTLAKE 379
A+T+G+ Y++ +E
Sbjct: 73 GAMTVGMGYSMYRE 86
>BC070277-1|AAH70277.1| 93|Homo sapiens HIG1 domain family, member
1A protein.
Length = 93
Score = 67.7 bits (158), Expect = 4e-11
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +2
Query: 158 EESQSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQLRVAAQGTVV 337
EE Q +L RK+K++PF+ YG Y K RG S+ L+ +RVAAQG VV
Sbjct: 13 EEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVV 72
Query: 338 SALTIGLAYTLAKE 379
A+T+G+ Y++ +E
Sbjct: 73 GAMTVGMGYSMYRE 86
>BC009594-1|AAH09594.1| 93|Homo sapiens HIG1 domain family, member
1A protein.
Length = 93
Score = 67.7 bits (158), Expect = 4e-11
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +2
Query: 158 EESQSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQLRVAAQGTVV 337
EE Q +L RK+K++PF+ YG Y K RG S+ L+ +RVAAQG VV
Sbjct: 13 EEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVV 72
Query: 338 SALTIGLAYTLAKE 379
A+T+G+ Y++ +E
Sbjct: 73 GAMTVGMGYSMYRE 86
>BC009583-1|AAH09583.1| 93|Homo sapiens HIG1 domain family, member
1A protein.
Length = 93
Score = 67.7 bits (158), Expect = 4e-11
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +2
Query: 158 EESQSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQLRVAAQGTVV 337
EE Q +L RK+K++PF+ YG Y K RG S+ L+ +RVAAQG VV
Sbjct: 13 EEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVV 72
Query: 338 SALTIGLAYTLAKE 379
A+T+G+ Y++ +E
Sbjct: 73 GAMTVGMGYSMYRE 86
>BC000601-1|AAH00601.1| 93|Homo sapiens HIG1 domain family, member
1A protein.
Length = 93
Score = 67.7 bits (158), Expect = 4e-11
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +2
Query: 158 EESQSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQLRVAAQGTVV 337
EE Q +L RK+K++PF+ YG Y K RG S+ L+ +RVAAQG VV
Sbjct: 13 EEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVV 72
Query: 338 SALTIGLAYTLAKE 379
A+T+G+ Y++ +E
Sbjct: 73 GAMTVGMGYSMYRE 86
>AF145385-1|AAD33954.1| 93|Homo sapiens hypoxia-inducbile gene 1
protein.
Length = 93
Score = 67.7 bits (158), Expect = 4e-11
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +2
Query: 158 EESQSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQLRVAAQGTVV 337
EE Q +L RK+K++PF+ YG Y K RG S+ L+ +RVAAQG VV
Sbjct: 13 EEDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVV 72
Query: 338 SALTIGLAYTLAKE 379
A+T+G+ Y++ +E
Sbjct: 73 GAMTVGMGYSMYRE 86
>BC020667-1|AAH20667.1| 99|Homo sapiens HIG1 domain family, member
1B protein.
Length = 99
Score = 52.4 bits (120), Expect = 2e-06
Identities = 24/77 (31%), Positives = 40/77 (51%)
Frame = +2
Query: 155 NEESQSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQLRVAAQGTV 334
+E+ SE+L RK+++SP + Y Y + RG S+ L+ RVAAQ
Sbjct: 13 DEDCVSEKLLRKTRESPLVPIGLGGCLVVAAYRIYRLRSRGSTKMSIHLIHTRVAAQACA 72
Query: 335 VSALTIGLAYTLAKEHL 385
V A+ +G YT+ +++
Sbjct: 73 VGAIMLGAVYTMYSDYV 89
>AB038022-1|BAA90726.1| 99|Homo sapiens CLST 11240 protein
protein.
Length = 99
Score = 52.4 bits (120), Expect = 2e-06
Identities = 24/77 (31%), Positives = 40/77 (51%)
Frame = +2
Query: 155 NEESQSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQLRVAAQGTV 334
+E+ SE+L RK+++SP + Y Y + RG S+ L+ RVAAQ
Sbjct: 13 DEDCVSEKLLRKTRESPLVPIGLGGCLVVAAYRIYRLRSRGSTKMSIHLIHTRVAAQACA 72
Query: 335 VSALTIGLAYTLAKEHL 385
V A+ +G YT+ +++
Sbjct: 73 VGAIMLGAVYTMYNDYV 89
>AB038021-1|BAA90725.1| 99|Homo sapiens CLST 11240 protein
protein.
Length = 99
Score = 52.4 bits (120), Expect = 2e-06
Identities = 24/77 (31%), Positives = 40/77 (51%)
Frame = +2
Query: 155 NEESQSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQLRVAAQGTV 334
+E+ SE+L RK+++SP + Y Y + RG S+ L+ RVAAQ
Sbjct: 13 DEDCVSEKLLRKTRESPLVPIGLGGCLVVAAYRIYRLRSRGSTKMSIHLIHTRVAAQACA 72
Query: 335 VSALTIGLAYTLAKEHL 385
V A+ +G YT+ +++
Sbjct: 73 VGAIMLGAVYTMYSDYV 89
>BC007502-1|AAH07502.1| 106|Homo sapiens HIG1 domain family, member
2A protein.
Length = 106
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/74 (36%), Positives = 40/74 (54%)
Frame = +2
Query: 155 NEESQSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQLRVAAQGTV 334
N ES E+ RK++++P + YG YS+ RG S +M+ R+AAQG
Sbjct: 31 NPESFKEKFVRKTRENPVVPIGCLATAAALTYGLYSFH-RGNSQRSQLMMRTRIAAQGFT 89
Query: 335 VSALTIGLAYTLAK 376
V+A+ +GLA T K
Sbjct: 90 VAAILLGLAVTAMK 103
>BC000587-1|AAH00587.1| 106|Homo sapiens Unknown (protein for
MGC:2198) protein.
Length = 106
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/74 (36%), Positives = 40/74 (54%)
Frame = +2
Query: 155 NEESQSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQLRVAAQGTV 334
N ES E+ RK++++P + YG YS+ RG S +M+ R+AAQG
Sbjct: 31 NPESFKEKFVRKTRENPVVPIGCLATAAALTYGLYSFH-RGNSQRSQLMMRTRIAAQGFT 89
Query: 335 VSALTIGLAYTLAK 376
V+A+ +GLA T K
Sbjct: 90 VAAILLGLAVTAMK 103
>BC040890-1|AAH40890.1| 106|Homo sapiens HIGD2BP protein protein.
Length = 106
Score = 39.1 bits (87), Expect = 0.015
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +2
Query: 155 NEESQSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQLRVAAQGTV 334
N E E+ RK++++P + G Y + + G S +M ++AAQG
Sbjct: 31 NPEGFKEKFLRKTRENPVVPIGFLCTAAVLTNGLYCFHQ-GNSQCSRLMMHTQIAAQGFT 89
Query: 335 VSALTIGLAYTLAK 376
++A+ +GLA T K
Sbjct: 90 IAAILLGLAATAMK 103
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,998,728
Number of Sequences: 237096
Number of extensions: 1700930
Number of successful extensions: 2561
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2559
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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