Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5j07
         (702 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070609-1|AAL48080.1|  101|Drosophila melanogaster RE71331p pro...    99   3e-21
AE014297-1280|AAN13498.1|   95|Drosophila melanogaster CG17734-P...    99   3e-21
AE014297-1279|AAF54624.1|  101|Drosophila melanogaster CG17734-P...    99   3e-21
AY089682-1|AAL90420.1|   95|Drosophila melanogaster RH54117p pro...    99   5e-21
AY118378-1|AAM48407.1|  100|Drosophila melanogaster RE25483p pro...    97   2e-20
AE013599-1088|AAF58798.1|  100|Drosophila melanogaster CG11825-P...    97   2e-20
AY071104-1|AAL48726.1|  102|Drosophila melanogaster RE16337p pro...    41   0.001
AE014298-2369|AAF48593.1|  102|Drosophila melanogaster CG9921-PA...    41   0.001
BT001286-1|AAN71042.1|  932|Drosophila melanogaster AT09001p pro...    29   8.1  
AY094627-1|AAM10980.1|  787|Drosophila melanogaster AT01413p pro...    29   8.1  
AE014297-3217|AAF56048.1|  919|Drosophila melanogaster CG4907-PA...    29   8.1  

>AY070609-1|AAL48080.1|  101|Drosophila melanogaster RE71331p
           protein.
          Length = 101

 Score =   99 bits (238), Expect = 3e-21
 Identities = 50/93 (53%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
 Frame = +2

Query: 131 NSQQIFEYNEES-QSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQ 307
           +S+ +F+  E++ Q+ +L+RK+K+SPFM             GAY Y+ RG MSTSVFLMQ
Sbjct: 2   SSKSLFDSEEDAAQANKLSRKAKESPFMLVGITGFVAAGLIGAYKYRNRGTMSTSVFLMQ 61

Query: 308 LRVAAQGTVVSALTIGLAYTLAKEHLFKDSKKE 406
           LRVAAQGTVV  LT+GLAY++AKE+LF  + KE
Sbjct: 62  LRVAAQGTVVGCLTLGLAYSMAKEYLFDKAPKE 94


>AE014297-1280|AAN13498.1|   95|Drosophila melanogaster CG17734-PB,
           isoform B protein.
          Length = 95

 Score =   99 bits (238), Expect = 3e-21
 Identities = 50/93 (53%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
 Frame = +2

Query: 131 NSQQIFEYNEES-QSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQ 307
           +S+ +F+  E++ Q+ +L+RK+K+SPFM             GAY Y+ RG MSTSVFLMQ
Sbjct: 2   SSKSLFDSEEDAAQANKLSRKAKESPFMLVGITGFVAAGLIGAYKYRNRGTMSTSVFLMQ 61

Query: 308 LRVAAQGTVVSALTIGLAYTLAKEHLFKDSKKE 406
           LRVAAQGTVV  LT+GLAY++AKE+LF  + KE
Sbjct: 62  LRVAAQGTVVGCLTLGLAYSMAKEYLFDKAPKE 94


>AE014297-1279|AAF54624.1|  101|Drosophila melanogaster CG17734-PA,
           isoform A protein.
          Length = 101

 Score =   99 bits (238), Expect = 3e-21
 Identities = 50/93 (53%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
 Frame = +2

Query: 131 NSQQIFEYNEES-QSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQ 307
           +S+ +F+  E++ Q+ +L+RK+K+SPFM             GAY Y+ RG MSTSVFLMQ
Sbjct: 2   SSKSLFDSEEDAAQANKLSRKAKESPFMLVGITGFVAAGLIGAYKYRNRGTMSTSVFLMQ 61

Query: 308 LRVAAQGTVVSALTIGLAYTLAKEHLFKDSKKE 406
           LRVAAQGTVV  LT+GLAY++AKE+LF  + KE
Sbjct: 62  LRVAAQGTVVGCLTLGLAYSMAKEYLFDKAPKE 94


>AY089682-1|AAL90420.1|   95|Drosophila melanogaster RH54117p
           protein.
          Length = 95

 Score = 99.1 bits (236), Expect = 5e-21
 Identities = 50/93 (53%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
 Frame = +2

Query: 131 NSQQIFEYNEES-QSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQ 307
           +S+ +F   E++ Q+ +L+RK+K+SPFM             GAY Y+ RG MSTSVFLMQ
Sbjct: 2   SSKSLFNSEEDAAQANKLSRKAKESPFMLVGITGFVAAGLIGAYKYRNRGTMSTSVFLMQ 61

Query: 308 LRVAAQGTVVSALTIGLAYTLAKEHLFKDSKKE 406
           LRVAAQGTVV  LT+GLAY++AKE+LF  + KE
Sbjct: 62  LRVAAQGTVVGCLTLGLAYSMAKEYLFDKAPKE 94


>AY118378-1|AAM48407.1|  100|Drosophila melanogaster RE25483p
           protein.
          Length = 100

 Score = 97.1 bits (231), Expect = 2e-20
 Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
 Frame = +2

Query: 131 NSQQIFEYNEE-SQSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQ 307
           +S  +FE +E+ +Q+ +L+RK K+SPFM             GAY Y+ RG MSTSVFLMQ
Sbjct: 2   SSNSLFETDEDVAQANKLSRKVKESPFMLVGIAGFVAAGLIGAYKYRNRGSMSTSVFLMQ 61

Query: 308 LRVAAQGTVVSALTIGLAYTLAKEHLFKDSKK 403
           LRVAAQGTVV  LT GLAYT+AKE+L  +  K
Sbjct: 62  LRVAAQGTVVGCLTAGLAYTMAKEYLLHEEPK 93


>AE013599-1088|AAF58798.1|  100|Drosophila melanogaster CG11825-PA
           protein.
          Length = 100

 Score = 97.1 bits (231), Expect = 2e-20
 Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
 Frame = +2

Query: 131 NSQQIFEYNEE-SQSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQ 307
           +S  +FE +E+ +Q+ +L+RK K+SPFM             GAY Y+ RG MSTSVFLMQ
Sbjct: 2   SSNSLFETDEDVAQANKLSRKVKESPFMLVGIAGFVAAGLIGAYKYRNRGSMSTSVFLMQ 61

Query: 308 LRVAAQGTVVSALTIGLAYTLAKEHLFKDSKK 403
           LRVAAQGTVV  LT GLAYT+AKE+L  +  K
Sbjct: 62  LRVAAQGTVVGCLTAGLAYTMAKEYLLHEEPK 93


>AY071104-1|AAL48726.1|  102|Drosophila melanogaster RE16337p
           protein.
          Length = 102

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 22/69 (31%), Positives = 35/69 (50%)
 Frame = +2

Query: 161 ESQSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQLRVAAQGTVVS 340
           E+  E+L RK K++P +             G Y+++  G    S  +M+ R+AAQG  V 
Sbjct: 30  ETTKEKLQRKIKENPLVPLGCLATTAALTAGLYNFRT-GNRKMSQLMMRSRIAAQGFTVM 88

Query: 341 ALTIGLAYT 367
           AL +G+  T
Sbjct: 89  ALVVGVVMT 97


>AE014298-2369|AAF48593.1|  102|Drosophila melanogaster CG9921-PA
           protein.
          Length = 102

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 22/69 (31%), Positives = 35/69 (50%)
 Frame = +2

Query: 161 ESQSERLARKSKDSPFMXXXXXXXXXXCGYGAYSYKKRGKMSTSVFLMQLRVAAQGTVVS 340
           E+  E+L RK K++P +             G Y+++  G    S  +M+ R+AAQG  V 
Sbjct: 30  ETTKEKLQRKIKENPLVPLGCLATTAALTAGLYNFRT-GNRKMSQLMMRSRIAAQGFTVM 88

Query: 341 ALTIGLAYT 367
           AL +G+  T
Sbjct: 89  ALVVGVVMT 97


>BT001286-1|AAN71042.1|  932|Drosophila melanogaster AT09001p
           protein.
          Length = 932

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 452 LGNLHIAHFKDLQY*IRPLLSDKSHVFKVHIIHM 553
           +GN H+ +F  +   IRPL+    H  +V I++M
Sbjct: 609 IGNSHVVYFSMILSIIRPLILGHQHSTRVWIVNM 642


>AY094627-1|AAM10980.1|  787|Drosophila melanogaster AT01413p
           protein.
          Length = 787

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 452 LGNLHIAHFKDLQY*IRPLLSDKSHVFKVHIIHM 553
           +GN H+ +F  +   IRPL+    H  +V I++M
Sbjct: 464 IGNSHVVYFSMILSIIRPLILGHQHSTRVWIVNM 497


>AE014297-3217|AAF56048.1|  919|Drosophila melanogaster CG4907-PA
           protein.
          Length = 919

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 452 LGNLHIAHFKDLQY*IRPLLSDKSHVFKVHIIHM 553
           +GN H+ +F  +   IRPL+    H  +V I++M
Sbjct: 596 IGNSHVVYFSMILSIIRPLILGHQHSTRVWIVNM 629


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,294,834
Number of Sequences: 53049
Number of extensions: 530786
Number of successful extensions: 958
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)