Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5j07
(702 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 2.8
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 4.9
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 4.9
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 4.9
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 4.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 4.9
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 22 6.5
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 22 6.5
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 21 8.6
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 21 8.6
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 21 8.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 8.6
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 459 TCT*HILKICSIKLDPCCQI 518
+CT IL +C I +D C I
Sbjct: 124 SCTASILNLCMISVDRFCAI 143
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 615 NIILHKNNNY*LNISGNS 562
N +H NNNY N + N+
Sbjct: 87 NRTIHNNNNYKYNYNNNN 104
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 615 NIILHKNNNY*LNISGNS 562
N +H NNNY N + N+
Sbjct: 87 NKTIHNNNNYKYNYNNNN 104
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 615 NIILHKNNNY*LNISGNS 562
N +H NNNY N + N+
Sbjct: 87 NKTIHNNNNYKYNYNNNN 104
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 615 NIILHKNNNY*LNISGNS 562
N +H NNNY N + N+
Sbjct: 87 NKTIHNNNNYKYNYNNNN 104
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 615 NIILHKNNNY*LNISGNS 562
N +H NNNY N + N+
Sbjct: 320 NKTIHNNNNYKYNYNNNN 337
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 615 NIILHKNNNY*LNISGN 565
N +H NNNY N + N
Sbjct: 87 NKTIHNNNNYKYNYNNN 103
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 21.8 bits (44), Expect = 6.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 299 LMQLRVAAQGTVVSALTIGLAYTLAKEHLFKDSK 400
+MQ + A GT SA T+ + + +E+ DS+
Sbjct: 350 MMQAWMTALGTASSAATLPITFRCLEENNKIDSR 383
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 21.4 bits (43), Expect = 8.6
Identities = 5/18 (27%), Positives = 12/18 (66%)
Frame = -3
Query: 577 YKWQQPVVHMNYMNFKNM 524
YKW ++H+ + ++K +
Sbjct: 94 YKWNNQILHILWTSYKKV 111
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 21.4 bits (43), Expect = 8.6
Identities = 5/18 (27%), Positives = 12/18 (66%)
Frame = -3
Query: 577 YKWQQPVVHMNYMNFKNM 524
YKW ++H+ + ++K +
Sbjct: 77 YKWNNQILHILWTSYKKV 94
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 86 VLFLWILISLSDTMTNSQQIFEY 154
VLF +L L+ NS+ FEY
Sbjct: 319 VLFFGLLSDLAIGCWNSEHFFEY 341
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 462 CT*HILKICSIKLD 503
CT IL +C+I LD
Sbjct: 149 CTASILNLCAISLD 162
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,583
Number of Sequences: 438
Number of extensions: 3518
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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