Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5j04
         (341 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031863-3|CAA21314.1|  222|Drosophila melanogaster EG:EG0003.7 ...   113   6e-26
AF172636-1|AAD46929.2|  244|Drosophila melanogaster LD24492p pro...   113   6e-26
AE013599-2364|AAF57941.2|  261|Drosophila melanogaster CG6341-PA...   113   6e-26
BT003281-1|AAO25038.1|  268|Drosophila melanogaster LD01705p pro...    96   9e-21
AE014134-1789|AAF52880.1|  229|Drosophila melanogaster CG4912-PA...    96   9e-21
AE014134-1788|AAF52879.1|  256|Drosophila melanogaster CG4912-PB...    96   9e-21
AE014296-812|AAZ66053.1|  180|Drosophila melanogaster CG33764-PA...    29   1.2  
BT003639-1|AAO39643.1|  916|Drosophila melanogaster AT16639p pro...    28   2.8  
AE014298-1320|AAF46481.2|  916|Drosophila melanogaster CG32703-P...    28   2.8  

>AL031863-3|CAA21314.1|  222|Drosophila melanogaster EG:EG0003.7
           protein.
          Length = 222

 Score =  113 bits (272), Expect = 6e-26
 Identities = 53/57 (92%), Positives = 55/57 (96%)
 Frame = +3

Query: 99  GSLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQEFEDFVQSVDIAAFNKI 269
           G LWGASKLVPVGYGINKLQIMCVIEDDKVS+DLL EKI+EFEDFVQSVDIAAFNKI
Sbjct: 166 GLLWGASKLVPVGYGINKLQIMCVIEDDKVSIDLLQEKIEEFEDFVQSVDIAAFNKI 222


>AF172636-1|AAD46929.2|  244|Drosophila melanogaster LD24492p
           protein.
          Length = 244

 Score =  113 bits (272), Expect = 6e-26
 Identities = 53/57 (92%), Positives = 55/57 (96%)
 Frame = +3

Query: 99  GSLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQEFEDFVQSVDIAAFNKI 269
           G LWGASKLVPVGYGINKLQIMCVIEDDKVS+DLL EKI+EFEDFVQSVDIAAFNKI
Sbjct: 188 GLLWGASKLVPVGYGINKLQIMCVIEDDKVSIDLLQEKIEEFEDFVQSVDIAAFNKI 244


>AE013599-2364|AAF57941.2|  261|Drosophila melanogaster CG6341-PA
           protein.
          Length = 261

 Score =  113 bits (272), Expect = 6e-26
 Identities = 53/57 (92%), Positives = 55/57 (96%)
 Frame = +3

Query: 99  GSLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQEFEDFVQSVDIAAFNKI 269
           G LWGASKLVPVGYGINKLQIMCVIEDDKVS+DLL EKI+EFEDFVQSVDIAAFNKI
Sbjct: 205 GLLWGASKLVPVGYGINKLQIMCVIEDDKVSIDLLQEKIEEFEDFVQSVDIAAFNKI 261


>BT003281-1|AAO25038.1|  268|Drosophila melanogaster LD01705p
           protein.
          Length = 268

 Score = 96.3 bits (229), Expect = 9e-21
 Identities = 44/63 (69%), Positives = 52/63 (82%)
 Frame = +3

Query: 81  RR*NRPGSLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQEFEDFVQSVDIAAF 260
           R+  + G LWGASK VPV +GI KL I CV+EDDKVS+D LTE+I++ EDFVQSVDIAAF
Sbjct: 206 RKITQDGLLWGASKFVPVAFGIQKLSISCVVEDDKVSIDWLTEEIEKLEDFVQSVDIAAF 265

Query: 261 NKI 269
           NKI
Sbjct: 266 NKI 268


>AE014134-1789|AAF52880.1|  229|Drosophila melanogaster CG4912-PA,
           isoform A protein.
          Length = 229

 Score = 96.3 bits (229), Expect = 9e-21
 Identities = 44/63 (69%), Positives = 52/63 (82%)
 Frame = +3

Query: 81  RR*NRPGSLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQEFEDFVQSVDIAAF 260
           R+  + G LWGASK VPV +GI KL I CV+EDDKVS+D LTE+I++ EDFVQSVDIAAF
Sbjct: 167 RKITQDGLLWGASKFVPVAFGIQKLSISCVVEDDKVSIDWLTEEIEKLEDFVQSVDIAAF 226

Query: 261 NKI 269
           NKI
Sbjct: 227 NKI 229


>AE014134-1788|AAF52879.1|  256|Drosophila melanogaster CG4912-PB,
           isoform B protein.
          Length = 256

 Score = 96.3 bits (229), Expect = 9e-21
 Identities = 44/63 (69%), Positives = 52/63 (82%)
 Frame = +3

Query: 81  RR*NRPGSLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKIQEFEDFVQSVDIAAF 260
           R+  + G LWGASK VPV +GI KL I CV+EDDKVS+D LTE+I++ EDFVQSVDIAAF
Sbjct: 194 RKITQDGLLWGASKFVPVAFGIQKLSISCVVEDDKVSIDWLTEEIEKLEDFVQSVDIAAF 253

Query: 261 NKI 269
           NKI
Sbjct: 254 NKI 256


>AE014296-812|AAZ66053.1|  180|Drosophila melanogaster CG33764-PA
           protein.
          Length = 180

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 248 VNRLYKIFKFLNFFCQQINRNFVVLD 171
           +  +Y + KF N  CQ ++R+F + D
Sbjct: 19  ITEIYSVVKFTNIQCQSLDRDFALFD 44


>BT003639-1|AAO39643.1|  916|Drosophila melanogaster AT16639p
           protein.
          Length = 916

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = -1

Query: 272 LDFVKCSNVNRLYKIFKFLNFFCQQINRNFVVLDDTHNLQFIYAIPNRHKF 120
           +D  K SN    Y +F+F+      + +   VL D H    +Y + N  KF
Sbjct: 89  VDIFKASNNLDFYLVFEFMESDLHNVIKRGNVLKDVHKRFVMYQLINAIKF 139


>AE014298-1320|AAF46481.2|  916|Drosophila melanogaster CG32703-PA
           protein.
          Length = 916

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = -1

Query: 272 LDFVKCSNVNRLYKIFKFLNFFCQQINRNFVVLDDTHNLQFIYAIPNRHKF 120
           +D  K SN    Y +F+F+      + +   VL D H    +Y + N  KF
Sbjct: 89  VDIFKASNNLDFYLVFEFMESDLHNVIKRGNVLKDVHKRFVMYQLINAIKF 139


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,138,521
Number of Sequences: 53049
Number of extensions: 259237
Number of successful extensions: 598
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)