Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5j03
         (703 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   1.7  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    24   5.3  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    24   5.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   9.3  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
 Frame = +3

Query: 195  QQRMMAELKKEPVINFKFECSVCFETYSQQSNDTCPFLIPT-------TCDHGFCFKCVI 353
            +    AEL+K  V+         FE +   +N   P+L+         TCD GF  K   
Sbjct: 915  EDHTFAELRKLEVLRLDGNRITSFEVWQLSAN---PYLVEIALANNLWTCDCGFVNKLRS 971

Query: 354  DLQSNAMNI 380
             LQSNA  I
Sbjct: 972  YLQSNADKI 980


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 246 FECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVI 353
           F+C VC E++           I T C H FC +C +
Sbjct: 245 FKCYVCRESFVDP--------IVTKCKHYFCERCAL 272


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 246 FECSVCFETYSQQSNDTCPFLIPTTCDHGFCFKCVI 353
           F+C VC E++           I T C H FC +C +
Sbjct: 245 FKCYVCRESFVDP--------IVTKCKHYFCERCAL 272


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 243 KFECSVCFETYSQQSN 290
           +FEC +C  TY++  N
Sbjct: 523 RFECPLCRATYTRSDN 538


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,635
Number of Sequences: 2352
Number of extensions: 15531
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)