Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5i19
         (662 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    25   1.6  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   2.1  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   2.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   8.6  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   8.6  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   8.6  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   8.6  

>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 654 YSSSASLPMYLMTVSMMIFKTPMLCS 577
           Y  S + P Y  +V+ +++KTP+  S
Sbjct: 181 YKGSLTTPPYFESVTWLVYKTPIYVS 206


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
 Frame = +2

Query: 245 LDLCASVKLTP----FKPMRPPKPMQCWIHP 325
           L+    VKLT     + P+    P+ CWIHP
Sbjct: 542 LEQIVLVKLTAAVIEWDPLTDTVPIHCWIHP 572


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 19/76 (25%), Positives = 31/76 (40%)
 Frame = +2

Query: 431 EHAKLYYRHLLRNDQAEARKTILNADDVYECVLIKPIRTEHFRSVDEAGEHNMGVLKIII 610
           EHA       +    A  R  +  A +  ECV+I  +R  H           +G L+I  
Sbjct: 676 EHAAAVAEEAVERVHAWMRHHLQLAPEKTECVMISSLRRGH-----PEIPIRVGGLEIRS 730

Query: 611 DTVIKYIGKLADDEYI 658
              I+Y+G +  D ++
Sbjct: 731 KQAIRYLGVMIHDHFL 746


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 59   RVTQEDALDIELDFRNFFKMQS*RTYG 139
            RVTQE A + +++FR    MQ  R  G
Sbjct: 1609 RVTQESAKNFQIEFRGKQVMQFGRIDG 1635


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +2

Query: 335 NCKVTRPRNNYSDPDNENDMLHMTVLNSVFLNEHAKL 445
           N       N  S  +N N+ LH   L    L EH +L
Sbjct: 205 NSSSNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQL 241


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +2

Query: 335 NCKVTRPRNNYSDPDNENDMLHMTVLNSVFLNEHAKL 445
           N       N  S  +N N+ LH   L    L EH +L
Sbjct: 205 NSSSNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQL 241


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = +2

Query: 335 NCKVTRPRNNYSDPDNENDMLHMTVLNSVFLNEHAKL 445
           N       N  S  +N N+ LH   L    L EH +L
Sbjct: 157 NSSSNNNNNTISSNNNNNNSLHHGPLRDKELTEHEQL 193


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,785
Number of Sequences: 2352
Number of extensions: 12457
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)