Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5i14
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    29   0.15 
Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.           26   1.0  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   1.8  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   4.2  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   4.2  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   7.3  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   9.7  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   9.7  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 29.1 bits (62), Expect = 0.15
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +1

Query: 469  KENIYAIQTLKDFQYMEEGK-DQGLNVREKAKQLANLLKDDERLKNERARALKAKQRFAQ 645
            K N+++IQ ++    + + + D   + REK  QLA + +  E+++ E    LK    F +
Sbjct: 870  KNNVFSIQEVEQLVTLWKNRNDVQKSFREKQDQLARMREHYEQIQRELKDKLKRPTPFER 929

Query: 646  SASAF 660
              S F
Sbjct: 930  MRSFF 934


>Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
 Frame = +3

Query: 237 CSGQSSRGDFKRPMGSVQHAHGGD--RRPHVQRHGLHGDHADDMEAFK*PRQELEARLQS 410
           C+   S      P+G+ +HA GG   R   V +H  +   + D +      ++      S
Sbjct: 89  CTAGRSTSSLTVPLGTSRHASGGTVVRVARVVQHPKYDSSSIDFDYSLLELEDELTFSDS 148

Query: 411 SGPDGVPHQDRQRESG 458
             P G+P QD   + G
Sbjct: 149 VQPVGLPKQDETVKDG 164


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 223  HNYSDAQVKVREATSNDPWGPSSTLMAEIAD 315
            HN +D  VK+R   ++DP   +  L  +I D
Sbjct: 1184 HNINDPIVKLRATDADDPTNGNGQLSFDIVD 1214


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 719 PDSPEGKVGLEGVSSAPS 666
           PD+P+G+   EGV S+ S
Sbjct: 86  PDAPQGRSAAEGVPSSAS 103


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 369 TLPYHLHDLREGHDVVREVGDLRHERAGRTPWVV 268
           T  Y L    E  +V+ E   + H R GR P V+
Sbjct: 107 TTVYFLKRKSEAAEVIEEYVTMVHNRFGRNPIVI 140


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +1

Query: 520 EGKDQGLNVREKAKQLANLLKDDERLKNERARALKAK 630
           E K+Q   + E+  ++  LL++++     R   LKA+
Sbjct: 109 EMKEQNFRLAEQITRMCQLLQEEKEEAKRREEKLKAQ 145


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 719 PDSPEGKVGLEGVSSAPSLP 660
           P  PEGK+GL G+      P
Sbjct: 686 PVGPEGKMGLRGMKGDKGRP 705


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 8/123 (6%)
 Frame = +1

Query: 151  KMPRARDEMQVNVAGLRRNIKNLAHNYSDAQVKVREATSNDPWGPSSTLMAEIAD--LTY 324
            K+ +  DE+++ +      I  + +   D   ++       PW P       + +    Y
Sbjct: 896  KLLKQNDELKLEIKKKENEITKVRNENKDGYDRISGMEQKYPWIPEDKEFFGVKNTRYDY 955

Query: 325  NVMAFTEIMQMIWKRLNDHGKNWRHV-YKALVLME-----YLIKTGSEKVAMQCKENIYA 486
            N     E  + + K  +   K  R+V  KA+VL+E     Y      +KV    K+ I A
Sbjct: 956  NKEDPQEAGRKLKKLQDSKDKMSRNVNQKAMVLLEREEEQYKEVMRRKKVVEDDKKKIQA 1015

Query: 487  IQT 495
            I T
Sbjct: 1016 IIT 1018


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,246
Number of Sequences: 2352
Number of extensions: 13577
Number of successful extensions: 80
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)