Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5i14
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69885-2|CAC35825.1| 469|Caenorhabditis elegans Hypothetical pr... 244 7e-65
Z69885-1|CAC35824.1| 467|Caenorhabditis elegans Hypothetical pr... 244 7e-65
Z67754-1|CAA91751.1| 483|Caenorhabditis elegans Hypothetical pr... 119 2e-27
Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF273840-1|AAG15187.1| 553|Caenorhabditis elegans sex-1 protein. 30 1.5
AF049869-1|AAC77795.1| 556|Caenorhabditis elegans SEX-1 protein. 30 1.5
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 29 3.4
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 29 4.5
Z36238-8|CAH04738.1| 448|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z36238-7|CAA85278.2| 506|Caenorhabditis elegans Hypothetical pr... 28 5.9
U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated p... 28 7.9
M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein. 28 7.9
>Z69885-2|CAC35825.1| 469|Caenorhabditis elegans Hypothetical
protein T04C10.2b protein.
Length = 469
Score = 244 bits (596), Expect = 7e-65
Identities = 104/156 (66%), Positives = 137/156 (87%)
Frame = +1
Query: 181 VNVAGLRRNIKNLAHNYSDAQVKVREATSNDPWGPSSTLMAEIADLTYNVMAFTEIMQMI 360
++++ +RR +KN+A+N+SDAQVKVREATSNDPWGPS+ LM+EIADLT+N MAFTEIM ++
Sbjct: 1 MSISTIRRQVKNVAYNFSDAQVKVREATSNDPWGPSTALMSEIADLTHNPMAFTEIMSIV 60
Query: 361 WKRLNDHGKNWRHVYKALVLMEYLIKTGSEKVAMQCKENIYAIQTLKDFQYMEEGKDQGL 540
WKRLND GKNWRHVYK+LVL+++LIK G EKVA QC+EN++ I+TLKDFQ++E+ +DQGL
Sbjct: 61 WKRLNDSGKNWRHVYKSLVLLDFLIKCGHEKVAQQCRENVFTIETLKDFQHVEDNRDQGL 120
Query: 541 NVREKAKQLANLLKDDERLKNERARALKAKQRFAQS 648
N+REKAKQ+ +LL DDERLKNER R + + +F Q+
Sbjct: 121 NIREKAKQITSLLSDDERLKNERTRFILTRNKFKQN 156
>Z69885-1|CAC35824.1| 467|Caenorhabditis elegans Hypothetical
protein T04C10.2a protein.
Length = 467
Score = 244 bits (596), Expect = 7e-65
Identities = 104/156 (66%), Positives = 137/156 (87%)
Frame = +1
Query: 181 VNVAGLRRNIKNLAHNYSDAQVKVREATSNDPWGPSSTLMAEIADLTYNVMAFTEIMQMI 360
++++ +RR +KN+A+N+SDAQVKVREATSNDPWGPS+ LM+EIADLT+N MAFTEIM ++
Sbjct: 1 MSISTIRRQVKNVAYNFSDAQVKVREATSNDPWGPSTALMSEIADLTHNPMAFTEIMSIV 60
Query: 361 WKRLNDHGKNWRHVYKALVLMEYLIKTGSEKVAMQCKENIYAIQTLKDFQYMEEGKDQGL 540
WKRLND GKNWRHVYK+LVL+++LIK G EKVA QC+EN++ I+TLKDFQ++E+ +DQGL
Sbjct: 61 WKRLNDSGKNWRHVYKSLVLLDFLIKCGHEKVAQQCRENVFTIETLKDFQHVEDNRDQGL 120
Query: 541 NVREKAKQLANLLKDDERLKNERARALKAKQRFAQS 648
N+REKAKQ+ +LL DDERLKNER R + + +F Q+
Sbjct: 121 NIREKAKQITSLLSDDERLKNERTRFILTRNKFKQN 156
>Z67754-1|CAA91751.1| 483|Caenorhabditis elegans Hypothetical
protein C34E11.1 protein.
Length = 483
Score = 119 bits (286), Expect = 2e-27
Identities = 53/135 (39%), Positives = 91/135 (67%), Gaps = 4/135 (2%)
Frame = +1
Query: 226 NYSDAQVKVREATSNDPWGPSSTLMAEIADLTYN--VMAFTEIMQMIWKRLNDHGKN-WR 396
NY A + VREAT+ DPWGP+ M +I + T + + F + +++R+ ++ K+ WR
Sbjct: 38 NYPKAMMDVREATNEDPWGPTGPQMKKICEYTRSRYMEDFYNVYTPLFQRMLENNKDAWR 97
Query: 397 HVYKALVLMEYLIKTGSEKVAMQCKENIYAIQTLKDFQYMEE-GKDQGLNVREKAKQLAN 573
VYK+L+L++YL+K GSE+ + +E Y ++ L+ ++Y++E GKDQG+N+R + KQ+
Sbjct: 98 RVYKSLILLDYLLKNGSERFVQEAREKAYELRRLESYKYIDEKGKDQGINIRHRVKQILE 157
Query: 574 LLKDDERLKNERARA 618
++ DDE L+ ER +A
Sbjct: 158 MMNDDELLQAERQKA 172
>Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical
protein K01C8.5 protein.
Length = 707
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/104 (20%), Positives = 44/104 (42%)
Frame = +3
Query: 144 DFQDAPGPGRDASECSRSQKEYKEPRTQLFRCSGQSSRGDFKRPMGSVQHAHGGDRRPHV 323
D+ D PGP S + Y+E R +L + +GD R + ++ R+ +
Sbjct: 201 DYDDQPGPSNRHYGVSSHPEYYREDRWRLAEGDYEVDKGDGSRQLNKEKYLK-KRRKQMI 259
Query: 324 QRHGLHGDHADDMEAFK*PRQELEARLQSSGPDGVPHQDRQRES 455
+R + + +++ E + ++ + R P + H + ES
Sbjct: 260 ERESVDSEISEEEEEEEIYNKQTKRRRSQKTP--IQHNKNRTES 301
>AF273840-1|AAG15187.1| 553|Caenorhabditis elegans sex-1 protein.
Length = 553
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = -3
Query: 507 EIL*CLYRINVLFTLHRHFLAAGLDEVLHQDQSFVNVPPVLAVV--I*TLPYHL-HDLRE 337
+++ C++ +N L LH+ L +L ++ SF+N+PP++ + + TLP + H+ +E
Sbjct: 449 QLMKCIHELNRLNELHKQQL-----NILRENLSFLNLPPLVVEMFQLSTLPLPVNHNNQE 503
Query: 336 GH 331
H
Sbjct: 504 NH 505
>AF049869-1|AAC77795.1| 556|Caenorhabditis elegans SEX-1 protein.
Length = 556
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = -3
Query: 507 EIL*CLYRINVLFTLHRHFLAAGLDEVLHQDQSFVNVPPVLAVV--I*TLPYHL-HDLRE 337
+++ C++ +N L LH+ L +L ++ SF+N+PP++ + + TLP + H+ +E
Sbjct: 452 QLMKCIHELNRLNELHKQQL-----NILRENLSFLNLPPLVVEMFQLSTLPLPVNHNNQE 506
Query: 336 GH 331
H
Sbjct: 507 NH 508
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical
protein K04G2.8b protein.
Length = 1188
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -1
Query: 224 CARFFIFLLRP-ATFTCISSRARGILKVTSTTRSQKQNHIEKHSL 93
C + LL P A FT + A GILK S + H+E SL
Sbjct: 315 CLKVLASLLSPDARFTSLVDSATGILKYVSQYLANTSTHLELRSL 359
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical
protein K04G2.8a protein.
Length = 1186
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -1
Query: 224 CARFFIFLLRP-ATFTCISSRARGILKVTSTTRSQKQNHIEKHSL 93
C + LL P A FT + A GILK S + H+E SL
Sbjct: 315 CLKVLASLLSPDARFTSLVDSATGILKYVSQYLANTSTHLELRSL 359
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -1
Query: 224 CARFFIFLLRP-ATFTCISSRARGILKVTSTTRSQKQNHIEKHSL 93
C + LL P A FT + A GILK S + H+E SL
Sbjct: 315 CLKVLASLLSPDARFTSLVDSATGILKYVSQYLANTSTHLELRSL 359
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 291 HAHGGDRRPHVQRHGLHGDHADDME 365
H H G H HG H H DD E
Sbjct: 686 HGHHGAHHEHGAHHGAHHGHHDDKE 710
>Z36238-8|CAH04738.1| 448|Caenorhabditis elegans Hypothetical
protein R74.8b protein.
Length = 448
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +1
Query: 427 YLIKTGSEKVAMQCKENIYAIQTLKDFQYMEEGKDQGLNVREKAKQLANLLKDDERLKNE 606
Y+ K S +VA++ +E A ++ + EE +++ REK + K+++R E
Sbjct: 48 YIEKVRSHRVAVKAEEKRKA----EEKRRQEEKEEEARKAREKQIEEERKAKEEQRANEE 103
Query: 607 RAR 615
RA+
Sbjct: 104 RAK 106
>Z36238-7|CAA85278.2| 506|Caenorhabditis elegans Hypothetical
protein R74.8a protein.
Length = 506
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +1
Query: 427 YLIKTGSEKVAMQCKENIYAIQTLKDFQYMEEGKDQGLNVREKAKQLANLLKDDERLKNE 606
Y+ K S +VA++ +E A ++ + EE +++ REK + K+++R E
Sbjct: 48 YIEKVRSHRVAVKAEEKRKA----EEKRRQEEKEEEARKAREKQIEEERKAKEEQRANEE 103
Query: 607 RAR 615
RA+
Sbjct: 104 RAK 106
>U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated
protein 6 protein.
Length = 612
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 129 SCR*SDFQDAPGPGRDASECSRSQKEYKEPRTQLFRCSGQSSRGDF 266
SC S Q PG + C+R K Y++ R+ + C ++ DF
Sbjct: 421 SCNQSSGQCVCKPGVTGTTCNRCAKGYQQSRSTVTPCIKIPTKADF 466
>M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein.
Length = 612
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 129 SCR*SDFQDAPGPGRDASECSRSQKEYKEPRTQLFRCSGQSSRGDF 266
SC S Q PG + C+R K Y++ R+ + C ++ DF
Sbjct: 421 SCNQSSGQCVCKPGVTGTTCNRCAKGYQQSRSTVTPCIKIPTKADF 466
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,580,437
Number of Sequences: 27780
Number of extensions: 312000
Number of successful extensions: 1066
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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