Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5i09
         (722 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118962-1|AAM50822.1|  195|Drosophila melanogaster LD41522p pro...   109   3e-24
AE014297-4728|AAF57137.1|  195|Drosophila melanogaster CG12220-P...   109   3e-24
AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-P...    29   4.8  

>AY118962-1|AAM50822.1|  195|Drosophila melanogaster LD41522p
           protein.
          Length = 195

 Score =  109 bits (263), Expect = 3e-24
 Identities = 54/105 (51%), Positives = 68/105 (64%)
 Frame = +2

Query: 197 FIQVVQHLKNLERSILLSLFGQPPKELALAVSVNQQPKPTPKAFSIHDLIGDGFLLAVPK 376
           F+ +   ++NLE S+ L   G PP  LALA   +     + + FS+  LIGDG L AVPK
Sbjct: 6   FLSITNFIRNLE-SLFLPHGGHPPA-LALAGFQHDHSPKSSQEFSLKQLIGDGLLWAVPK 63

Query: 377 FRRTVEKRLNRKFGWPEYVWKPFVPKTNLKTCHECGHHHEQGRLC 511
            RR+VEKRL RKFG+PEY WKP   K NL++C +CGH HE G LC
Sbjct: 64  HRRSVEKRLKRKFGYPEYNWKPLREKRNLRSCLQCGHDHEMGVLC 108



 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 30/40 (75%), Positives = 35/40 (87%)
 Frame = +3

Query: 528 KGKRIVEMKKERPQWFSKNLLQKSTQQPSKSTDVKPTDLA 647
           K KRIVEMKK RP WF+KNLLQKSTQQ S++ +VKP+DLA
Sbjct: 156 KNKRIVEMKKPRPMWFTKNLLQKSTQQLSETKEVKPSDLA 195


>AE014297-4728|AAF57137.1|  195|Drosophila melanogaster CG12220-PA
           protein.
          Length = 195

 Score =  109 bits (263), Expect = 3e-24
 Identities = 54/105 (51%), Positives = 68/105 (64%)
 Frame = +2

Query: 197 FIQVVQHLKNLERSILLSLFGQPPKELALAVSVNQQPKPTPKAFSIHDLIGDGFLLAVPK 376
           F+ +   ++NLE S+ L   G PP  LALA   +     + + FS+  LIGDG L AVPK
Sbjct: 6   FLSITNFIRNLE-SLFLPHGGHPPA-LALAGFQHDHSPKSSQEFSLKQLIGDGLLWAVPK 63

Query: 377 FRRTVEKRLNRKFGWPEYVWKPFVPKTNLKTCHECGHHHEQGRLC 511
            RR+VEKRL RKFG+PEY WKP   K NL++C +CGH HE G LC
Sbjct: 64  HRRSVEKRLKRKFGYPEYNWKPLREKRNLRSCLQCGHDHEMGVLC 108



 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 30/40 (75%), Positives = 35/40 (87%)
 Frame = +3

Query: 528 KGKRIVEMKKERPQWFSKNLLQKSTQQPSKSTDVKPTDLA 647
           K KRIVEMKK RP WF+KNLLQKSTQQ S++ +VKP+DLA
Sbjct: 156 KNKRIVEMKKPRPMWFTKNLLQKSTQQLSETKEVKPSDLA 195


>AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-PC
            protein.
          Length = 1884

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 465  KHAMSVVTTTNKADYVQKEFWKGKRIVEMKKERPQW 572
            K  M    TT+ ADY+Q E WK     +  K+R +W
Sbjct: 1800 KRLMQNRRTTSMADYLQLEDWKPPTTSDNGKKRVRW 1835


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,655,634
Number of Sequences: 53049
Number of extensions: 611990
Number of successful extensions: 1400
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)