Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5i09
         (722 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    25   0.72 
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    23   2.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   5.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   5.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   5.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   6.7  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   6.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   6.7  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 25.0 bits (52), Expect = 0.72
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 299 QQPKPTPKAFSIHDLIGDGFLLAVPKF 379
           + P  TP+   IH+L+G   LLA P F
Sbjct: 326 KSPYHTPEPDCIHELLGHMPLLADPSF 352


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
 Frame = -2

Query: 493 VVVTTLMACF*ISFRYKWLPNIFRP-----PKFPIQSLFN 389
           + +  L+A    +F Y  LPN+ +P     P FP Q  FN
Sbjct: 5   IFIFALLATICAAFAYVPLPNVPQPGRRPFPTFPGQGPFN 44


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -2

Query: 568 CGLSFFISTILLPFQNSFCT*SALFVVVTTL 476
           C L FF+  +++PF    C    +   +T L
Sbjct: 339 CWLPFFLMYVIVPFCPDCCPSDRMVYFITWL 369


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -2

Query: 568 CGLSFFISTILLPFQNSFCT*SALFVVVTTL 476
           C L FF+  +++PF    C    +   +T L
Sbjct: 339 CWLPFFLMYVIVPFCPDCCPSDRMVYFITWL 369


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -2

Query: 568 CGLSFFISTILLPFQNSFCT*SALFVVVTTL 476
           C L FF+  +++PF    C    +   +T L
Sbjct: 339 CWLPFFLMYVIVPFCPDCCPSDRMVYFITWL 369


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 282 NASSFGG*PKRLNRIDLS 229
           N   FGG PKR+  I LS
Sbjct: 192 NIEWFGGNPKRITLIGLS 209


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 282 NASSFGG*PKRLNRIDLS 229
           N   FGG PKR+  I LS
Sbjct: 63  NIEWFGGNPKRITLIGLS 80


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 282 NASSFGG*PKRLNRIDLS 229
           N   FGG PKR+  I LS
Sbjct: 192 NIEWFGGNPKRITLIGLS 209


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,928
Number of Sequences: 438
Number of extensions: 4398
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)