Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5h23
(692 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 320 9e-88
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 320 9e-88
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 320 9e-88
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 320 9e-88
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 319 2e-87
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 31 2.0
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 31 2.0
AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2 pr... 29 7.9
AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon prot... 29 7.9
AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB... 29 7.9
AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA... 29 7.9
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 320 bits (787), Expect = 9e-88
Identities = 152/162 (93%), Positives = 156/162 (96%)
Frame = +3
Query: 171 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 350
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 351 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 530
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 531 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLS 656
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL+
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLT 198
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 320 bits (787), Expect = 9e-88
Identities = 152/162 (93%), Positives = 156/162 (96%)
Frame = +3
Query: 171 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 350
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 351 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 530
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 531 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLS 656
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL+
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLT 198
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 320 bits (787), Expect = 9e-88
Identities = 152/162 (93%), Positives = 156/162 (96%)
Frame = +3
Query: 171 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 350
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 351 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 530
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 531 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLS 656
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL+
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLT 198
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 320 bits (787), Expect = 9e-88
Identities = 152/162 (93%), Positives = 156/162 (96%)
Frame = +3
Query: 171 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 350
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 351 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 530
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 531 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLS 656
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL+
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLT 198
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 319 bits (784), Expect = 2e-87
Identities = 151/162 (93%), Positives = 156/162 (96%)
Frame = +3
Query: 171 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 350
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 351 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 530
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 531 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLS 656
IGKPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP+KLL+
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLT 198
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 177 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 34
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 177 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 34
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
>AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2
protein.
Length = 1711
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 445 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 549
RKSP + L+L+SC+ Q ++ T SE+ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEP 1070
>AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon protein.
Length = 1695
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 445 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 549
RKSP + L+L+SC+ Q ++ T SE+ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEP 1070
>AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB,
isoform B protein.
Length = 1695
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 445 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 549
RKSP + L+L+SC+ Q ++ T SE+ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEP 1070
>AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA,
isoform A protein.
Length = 1711
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 445 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 549
RKSP + L+L+SC+ Q ++ T SE+ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEP 1070
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,290,964
Number of Sequences: 53049
Number of extensions: 734504
Number of successful extensions: 3197
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2700
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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