Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5h04
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    29   0.040
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    27   0.16 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    27   0.16 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.6  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.6  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   6.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.0  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 0.040
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 103 RYKELQKFLQLSEMDEYIDSKYTVLRNM 186
           R+KELQK+L++     Y+ + Y +L  M
Sbjct: 189 RFKELQKYLKIETSCRYVGTLYRILTTM 216


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -3

Query: 723 FISNISYILTISPVKFFYFSHKISSFIVSNFFVTCAVVET 604
           ++  +  +L ++P K   F H+I S+ +  F+V  + V T
Sbjct: 4   WVLKVGNVLAMTPTKEKRFPHRIHSYFMVAFYVVFSSVST 43


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -3

Query: 723 FISNISYILTISPVKFFYFSHKISSFIVSNFFVTCAVVET 604
           ++  +  +L ++P K   F H+I S+ +  F+V  + V T
Sbjct: 4   WVLKVGNVLAMTPTKEKRFPHRIHSYFMVAFYVVFSSVST 43


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 628 CYLCCSRNNQFIVVGSF 578
           CY   SRN QFI + +F
Sbjct: 315 CYRLLSRNGQFIYLRTF 331


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 747 IKQHKHSFFISNISYILTISPVKF 676
           +K HKH   I  +S IL I+P+ +
Sbjct: 4   VKLHKHYVPIILLSKILGIAPISY 27


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 263 YQFGYSTRYLFLISISFLTPF 325
           YQ+G  T  LF++ ++ + P+
Sbjct: 168 YQYGTKTYSLFIVFMTVILPY 188


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 263 YQFGYSTRYLFLISISFLTPF 325
           YQ+G  T  LF++ ++ + P+
Sbjct: 168 YQYGTKTYSLFIVFMTVILPY 188


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 400 IEELVDIANNFEVDSDNIQ 456
           +EEL++IAN + +  D ++
Sbjct: 217 VEELMNIANYYRILGDTVE 235


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 532 VCNSNKSVRLIFFIFKITLFVNPSILECY 446
           V N   SVR +FF+ +I   VN    E Y
Sbjct: 369 VKNFRHSVRSVFFLSEIFGLVNLKYRETY 397


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,031
Number of Sequences: 336
Number of extensions: 3429
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)