Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5h04
         (749 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006795-7|AAF59497.2|  199|Caenorhabditis elegans Hypothetical ...    31   1.2  
Z81042-3|CAB02794.2|  660|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z77652-2|CAB01113.1|  665|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>AC006795-7|AAF59497.2|  199|Caenorhabditis elegans Hypothetical
           protein Y50D4B.1 protein.
          Length = 199

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -1

Query: 128 KNFCNSLYLFYMLDY*STVLYLLIHHHQVQGTFPAGCI 15
           KN  NS +L++ L +  T+L   +H H ++   P G I
Sbjct: 79  KNALNSNFLYHFLQHNDTLLIFSLHRHTLRNFLPLGKI 116


>Z81042-3|CAB02794.2|  660|Caenorhabditis elegans Hypothetical
           protein C27H6.3 protein.
          Length = 660

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/55 (25%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = +2

Query: 464 WIDKQSDLEYEEDKP-N*LVTIANLTKGLSSIEKGSQV*KRTNYNELIVSTTAQV 625
           WID    + YE+DK    L+T+  LT   ++++ G+++  RT + ++ + +  ++
Sbjct: 218 WIDSCVSMAYEKDKTLKELITLGKLT---TTVKAGAKIEFRTKFTDVHIRSADEI 269


>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical
           protein F26H11.2c protein.
          Length = 2266

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 391 ESIIEELVDIANNFEVDSDNIQELMD 468
           E ++E+ VDI++NF+  S N+  + D
Sbjct: 663 EELVEQFVDISDNFDAPSANLWRMGD 688


>Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical
           protein F26H11.2b protein.
          Length = 1693

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 391 ESIIEELVDIANNFEVDSDNIQELMD 468
           E ++E+ VDI++NF+  S N+  + D
Sbjct: 663 EELVEQFVDISDNFDAPSANLWRMGD 688


>Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical
           protein F26H11.2a protein.
          Length = 1691

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 391 ESIIEELVDIANNFEVDSDNIQELMD 468
           E ++E+ VDI++NF+  S N+  + D
Sbjct: 663 EELVEQFVDISDNFDAPSANLWRMGD 688


>Z77652-2|CAB01113.1|  665|Caenorhabditis elegans Hypothetical
           protein C06B3.2 protein.
          Length = 665

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 80  INSRAYKKGIKSYKSFYNFRKWMNISTV-NIPS 175
           I+S++ +K    Y+  Y+F  W N ST+ N+ S
Sbjct: 231 ISSKSIEKSASLYRLLYSFSFWTNASTILNVSS 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,226,451
Number of Sequences: 27780
Number of extensions: 298404
Number of successful extensions: 675
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)