Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5g14
         (724 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   3.1  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       23   7.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.6  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 304 DGDGPVLEVKFKIEHLKAPDKPQLN 378
           D  G VLE      HL+ PD PQL+
Sbjct: 519 DALGKVLERLILNRHLEDPDSPQLS 543


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 539 PATPSSGRPTVRGAFTHDRHSST 607
           P TP+  RPTV  A   +R +ST
Sbjct: 393 PTTPAKWRPTVNIADYENRPTST 415


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 133 SPTARIFIIRSVFQRRRPKNRREIYLFYLDR*LIIYVNE 17
           SP     +I SVF   RP      YL+++   LI  + E
Sbjct: 829 SPWKEDILIASVFNECRPDAETVAYLYHIRMELICPIPE 867


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,930
Number of Sequences: 2352
Number of extensions: 14263
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)