Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5g14
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK022118-1|BAB13963.1|  220|Homo sapiens protein ( Homo sapiens ...    32   1.8  
AF115509-1|AAD41257.1|  721|Homo sapiens LRR FLI-I interacting p...    32   2.4  
AK125454-1|BAC86168.1|  256|Homo sapiens protein ( Homo sapiens ...    30   7.3  

>AK022118-1|BAB13963.1|  220|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12056 fis, clone HEMBB1002050. ).
          Length = 220

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 503 SCARAALPASDGPA-TPSSGRPTVRGAFTHDRHSSTASCS 619
           S  RAALP S  PA TP+  R   R   T  R  +T SCS
Sbjct: 168 SPGRAALPRSPRPALTPAPARSPTRRQSTRRRSGATTSCS 207


>AF115509-1|AAD41257.1|  721|Homo sapiens LRR FLI-I interacting
           protein 2 protein.
          Length = 721

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = -1

Query: 268 LLIQIPFRRHNYGIIRHSAPDLNVVSCQHVGLQFSRHSTANGTRGSPTARIFIIRS 101
           LL  + F + NY  +RHS P     + Q   L     +T    R SPTA   ++RS
Sbjct: 145 LLSGLYFDQRNYSSLRHSKPTSAYYTRQSSSLYSDPLATYKSDRASPTANSGLLRS 200


>AK125454-1|BAC86168.1|  256|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43465 fis, clone OCBBF2036476. ).
          Length = 256

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +2

Query: 524 PASDGPATPSSGRPTVRGAFTHD--RHSSTASCSTSEAPCPLPLL 652
           P  D  A P+S R + R        RH+S +SC T  +PC   LL
Sbjct: 63  PHQDPGAAPASARLSPRSQVRPQPLRHASGSSCCTCSSPCASTLL 107


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,404,387
Number of Sequences: 237096
Number of extensions: 2078345
Number of successful extensions: 8646
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8636
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)