Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5g12
         (756 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p pro...    32   0.97 
AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA...    32   0.97 
AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA...    32   0.97 
AY071171-1|AAL48793.1|  171|Drosophila melanogaster RE21944p pro...    29   9.1  
AE014296-3610|AAF51773.2|  171|Drosophila melanogaster CG14568-P...    29   9.1  

>AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p protein.
          Length = 2486

 Score = 31.9 bits (69), Expect = 0.97
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 136  SSAAPSPRSHYPRKTPRCLKGNNLQVVGPLVSPH 237
            +SAAP P SH+P+ T    +  N   V  L++ H
Sbjct: 1419 TSAAPQPHSHFPQSTQMLPQSGNFSSVSHLLTTH 1452


>AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA
            protein.
          Length = 2486

 Score = 31.9 bits (69), Expect = 0.97
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 136  SSAAPSPRSHYPRKTPRCLKGNNLQVVGPLVSPH 237
            +SAAP P SH+P+ T    +  N   V  L++ H
Sbjct: 1419 TSAAPQPHSHFPQSTQMLPQSGNFSSVSHLLTTH 1452


>AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA
           protein.
          Length = 2016

 Score = 31.9 bits (69), Expect = 0.97
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = -3

Query: 112 MQETYDELETPPINLPTNSAPTPDLP---TTVPMEPNN 8
           ++ T  +L+ PP++LPTN  P P++         +PNN
Sbjct: 650 LESTAADLDPPPVSLPTNIFPAPEMQGVGNAAAADPNN 687


>AY071171-1|AAL48793.1|  171|Drosophila melanogaster RE21944p
           protein.
          Length = 171

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 79  PINLPTNSAPTPDLPTTVPMEPNNKY 2
           P +LPT +   PDL    P EP+N Y
Sbjct: 74  PFDLPTETEAQPDLTYGPPDEPDNTY 99


>AE014296-3610|AAF51773.2|  171|Drosophila melanogaster CG14568-PA
           protein.
          Length = 171

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 79  PINLPTNSAPTPDLPTTVPMEPNNKY 2
           P +LPT +   PDL    P EP+N Y
Sbjct: 74  PFDLPTETEAQPDLTYGPPDEPDNTY 99


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,652,251
Number of Sequences: 53049
Number of extensions: 646680
Number of successful extensions: 1944
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1941
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)