Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5g05
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.6  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   3.6  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   4.8  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   4.8  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    21   8.3  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   8.3  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 662 YSSLFVCCPTSSHLGVLADAVRRYV 588
           Y ++ V C TSS   ++A ++ RY+
Sbjct: 262 YIAMDVTCSTSSIFNLVAISIDRYI 286


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3

Query: 454 IVLDKNCGSGNSISDST 404
           I L +N  SG SISDST
Sbjct: 536 ISLSENLSSGLSISDST 552


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 275 TEQIEQLRKEATSSLHGD 328
           T++ +Q   E+TSSLH D
Sbjct: 187 TKERDQSEVESTSSLHSD 204


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 275 TEQIEQLRKEATSSLHGD 328
           T++ +Q   E+TSSLH D
Sbjct: 187 TKERDQSEVESTSSLHSD 204


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 508 QEERWYCYNRCPVRAT 555
           Q+ER  CY +C + AT
Sbjct: 64  QDERLMCYMKCIMIAT 79


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 508 QEERWYCYNRCPVRAT 555
           Q+ER  CY +C + AT
Sbjct: 38  QDERLMCYMKCIMIAT 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,834
Number of Sequences: 438
Number of extensions: 3736
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)