Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5f18
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   1.6  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    23   2.1  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    22   3.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.9  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   4.9  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   6.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.5  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.6  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 480 FLMDFLQNVLSWDVLQNDDTSRIRTNHNVIFCSS 379
           FL +FL N+L W+  Q  + +      NV+F  S
Sbjct: 246 FLANFLTNLLFWEFDQIVNVAYRMETWNVVFNGS 279


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 261 ITWQNT*IVTARSEHGKGPHINEN*N 338
           I +QN    T R++H KG H  +N N
Sbjct: 86  IWFQNHRYKTKRAQHEKGMHDQQNNN 111


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 343 GVVRSIMAFRLTGGTKDYIVVGSDSG 420
           G  ++I+ + L GGT D  ++  D+G
Sbjct: 17  GAEQNILVYDLGGGTFDVSILTIDNG 42


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 97  YCIEPHCG 120
           YC+EP CG
Sbjct: 324 YCVEPPCG 331


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 343 QIFQFSLMCGPFPC 302
           Q F  S+ CGPF C
Sbjct: 55  QCFGPSICCGPFGC 68


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +1

Query: 463 EKVHQETFGKSGCRRIVPGQYL 528
           EK   E F      +IVPG Y+
Sbjct: 394 EKFDPERFSDENKAKIVPGTYM 415


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 13  P*KRSSMACSESAILPATACAGSPVKI 93
           P   S M    +A  PAT  +GSP  +
Sbjct: 21  PISSSGMTSPAAAPPPATTSSGSPASV 47


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 97  YCIEPHCG 120
           YCI+P CG
Sbjct: 337 YCIQPPCG 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,569
Number of Sequences: 336
Number of extensions: 3744
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)