Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5f18
(636 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p pro... 281 6e-76
BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p pro... 281 6e-76
AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA... 281 6e-76
AY135133-2|AAN17640.1| 945|Drosophila melanogaster corkscrew ph... 29 5.3
AY135133-1|AAN17639.1| 845|Drosophila melanogaster corkscrew ph... 29 5.3
AY135132-2|AAN17638.1| 945|Drosophila melanogaster corkscrew ph... 29 5.3
AY135132-1|AAN17637.1| 845|Drosophila melanogaster corkscrew ph... 29 5.3
AY135131-2|AAN17636.1| 945|Drosophila melanogaster corkscrew ph... 29 5.3
AY135131-1|AAN17635.1| 845|Drosophila melanogaster corkscrew ph... 29 5.3
AY135130-2|AAN17634.1| 945|Drosophila melanogaster corkscrew ph... 29 5.3
AY135130-1|AAN17633.1| 845|Drosophila melanogaster corkscrew ph... 29 5.3
AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alph... 29 5.3
AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-P... 29 5.3
AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-P... 29 5.3
>BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p
protein.
Length = 1227
Score = 281 bits (689), Expect = 6e-76
Identities = 129/157 (82%), Positives = 145/157 (92%)
Frame = +1
Query: 166 MYLYNLTLQGSSAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTLMKIEIFG 345
MYLYNLTLQ ++ +THAVHGNFSG KQQE+++SRGK+LELLRPD NTGKVHTL+ EIFG
Sbjct: 1 MYLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFG 60
Query: 346 VVRSIMAFRLTGGTKDYIVVGSDSGRIIILEYIPTKNILEKVHQETFGKSGCRRIVPGQY 525
VR++MAFRLTGGTKDYIVVGSDSGRI+ILEY P+KN LEKVHQETFGKSGCRRIVPGQY
Sbjct: 61 CVRALMAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPGQY 120
Query: 526 LSIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSP 636
+IDPKGRAVMIGA+EKQKL YI+NRD +ARLTISSP
Sbjct: 121 FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSP 157
>BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p
protein.
Length = 1227
Score = 281 bits (689), Expect = 6e-76
Identities = 129/157 (82%), Positives = 145/157 (92%)
Frame = +1
Query: 166 MYLYNLTLQGSSAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTLMKIEIFG 345
MYLYNLTLQ ++ +THAVHGNFSG KQQE+++SRGK+LELLRPD NTGKVHTL+ EIFG
Sbjct: 1 MYLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFG 60
Query: 346 VVRSIMAFRLTGGTKDYIVVGSDSGRIIILEYIPTKNILEKVHQETFGKSGCRRIVPGQY 525
VR++MAFRLTGGTKDYIVVGSDSGRI+ILEY P+KN LEKVHQETFGKSGCRRIVPGQY
Sbjct: 61 CVRALMAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPGQY 120
Query: 526 LSIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSP 636
+IDPKGRAVMIGA+EKQKL YI+NRD +ARLTISSP
Sbjct: 121 FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSP 157
>AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA,
isoform A protein.
Length = 1227
Score = 281 bits (689), Expect = 6e-76
Identities = 129/157 (82%), Positives = 145/157 (92%)
Frame = +1
Query: 166 MYLYNLTLQGSSAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTLMKIEIFG 345
MYLYNLTLQ ++ +THAVHGNFSG KQQE+++SRGK+LELLRPD NTGKVHTL+ EIFG
Sbjct: 1 MYLYNLTLQKATGVTHAVHGNFSGGKQQEVLLSRGKSLELLRPDSNTGKVHTLLSTEIFG 60
Query: 346 VVRSIMAFRLTGGTKDYIVVGSDSGRIIILEYIPTKNILEKVHQETFGKSGCRRIVPGQY 525
VR++MAFRLTGGTKDYIVVGSDSGRI+ILEY P+KN LEKVHQETFGKSGCRRIVPGQY
Sbjct: 61 CVRALMAFRLTGGTKDYIVVGSDSGRIVILEYNPSKNALEKVHQETFGKSGCRRIVPGQY 120
Query: 526 LSIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSP 636
+IDPKGRAVMIGA+EKQKL YI+NRD +ARLTISSP
Sbjct: 121 FAIDPKGRAVMIGAVEKQKLAYIMNRDTQARLTISSP 157
>AY135133-2|AAN17640.1| 945|Drosophila melanogaster corkscrew
phosphatase splice variantB protein.
Length = 945
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 220 HGNFSGTKQQEIIISRGK 273
HGN SGT+ +++I+ RGK
Sbjct: 213 HGNLSGTEAEKLILERGK 230
>AY135133-1|AAN17639.1| 845|Drosophila melanogaster corkscrew
phosphatase splice variantA protein.
Length = 845
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 220 HGNFSGTKQQEIIISRGK 273
HGN SGT+ +++I+ RGK
Sbjct: 113 HGNLSGTEAEKLILERGK 130
>AY135132-2|AAN17638.1| 945|Drosophila melanogaster corkscrew
phosphatase splice variantB protein.
Length = 945
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 220 HGNFSGTKQQEIIISRGK 273
HGN SGT+ +++I+ RGK
Sbjct: 213 HGNLSGTEAEKLILERGK 230
>AY135132-1|AAN17637.1| 845|Drosophila melanogaster corkscrew
phosphatase splice variantA protein.
Length = 845
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 220 HGNFSGTKQQEIIISRGK 273
HGN SGT+ +++I+ RGK
Sbjct: 113 HGNLSGTEAEKLILERGK 130
>AY135131-2|AAN17636.1| 945|Drosophila melanogaster corkscrew
phosphatase splice variantB protein.
Length = 945
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 220 HGNFSGTKQQEIIISRGK 273
HGN SGT+ +++I+ RGK
Sbjct: 213 HGNLSGTEAEKLILERGK 230
>AY135131-1|AAN17635.1| 845|Drosophila melanogaster corkscrew
phosphatase splice variantA protein.
Length = 845
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 220 HGNFSGTKQQEIIISRGK 273
HGN SGT+ +++I+ RGK
Sbjct: 113 HGNLSGTEAEKLILERGK 130
>AY135130-2|AAN17634.1| 945|Drosophila melanogaster corkscrew
phosphatase splice variantB protein.
Length = 945
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 220 HGNFSGTKQQEIIISRGK 273
HGN SGT+ +++I+ RGK
Sbjct: 213 HGNLSGTEAEKLILERGK 230
>AY135130-1|AAN17633.1| 845|Drosophila melanogaster corkscrew
phosphatase splice variantA protein.
Length = 845
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 220 HGNFSGTKQQEIIISRGK 273
HGN SGT+ +++I+ RGK
Sbjct: 113 HGNLSGTEAEKLILERGK 130
>AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin
alpha1,2 protein.
Length = 3367
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 465 LQNVLSWDVLQNDDTSRIRTNHNVI 391
LQ VLSWDV++ D + + T NVI
Sbjct: 679 LQLVLSWDVIRGDRSGKPTTGPNVI 703
>AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-PA,
isoform A protein.
Length = 2731
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 465 LQNVLSWDVLQNDDTSRIRTNHNVI 391
LQ VLSWDV++ D + + T NVI
Sbjct: 679 LQLVLSWDVIRGDRSGKPTTGPNVI 703
>AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-PB,
isoform B protein.
Length = 3375
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 465 LQNVLSWDVLQNDDTSRIRTNHNVI 391
LQ VLSWDV++ D + + T NVI
Sbjct: 679 LQLVLSWDVIRGDRSGKPTTGPNVI 703
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,737,442
Number of Sequences: 53049
Number of extensions: 640034
Number of successful extensions: 1437
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1437
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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