Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5f08
         (270 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   1.5  
AF269154-1|AAF91399.1|   76|Anopheles gambiae transcription fact...    23   2.6  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    22   3.5  
AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription fact...    21   8.0  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
          transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 60 NCTEQTRDAKSFSNAAR 10
          +CT+QTR A    NAA+
Sbjct: 43 HCTQQTRQASCSDNAAQ 59


>AF269154-1|AAF91399.1|   76|Anopheles gambiae transcription factor
           proboscipedia protein.
          Length = 76

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -2

Query: 224 YTSVQIVSVQRHCHVIKHIC 165
           YT+ Q++ +++  H  K++C
Sbjct: 31  YTNTQLLELEKEFHFNKYLC 50


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 265 FFYLYIIY*HTKFGTLVFKSFLFNAIV 185
           F Y Y++Y    FGT+  K   F AI+
Sbjct: 141 FNYTYMLYLDWPFGTMYCKISQFVAIL 167


>AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription factor
           zen protein.
          Length = 52

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -2

Query: 224 YTSVQIVSVQRHCHVIKHIC 165
           +TS Q+V +++  H  +++C
Sbjct: 7   FTSSQLVELEKEFHSNRYLC 26


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,277
Number of Sequences: 2352
Number of extensions: 2695
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 15293985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)