Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5f07
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.2  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 282 LLWWLSFSICSIRHTNTTCSRC 217
           +L W+SF +  + H N T  RC
Sbjct: 142 ILLWISFFLNFMLHCNNTTWRC 163


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 258 ICSIRHTNTTCSRCNSSKPEA 196
           I S  +TNT+ S  NS+KP +
Sbjct: 423 ITSPSNTNTSTSSTNSNKPNS 443


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 240 CDEYYRC 260
           CD+YYRC
Sbjct: 488 CDKYYRC 494


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +3

Query: 102 HWHGHY 119
           HWHGH+
Sbjct: 134 HWHGHH 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.311    0.127    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,320
Number of Sequences: 336
Number of extensions: 2303
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)