Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5f07
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    26   0.97 
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    23   6.8  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    23   6.8  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 26.2 bits (55), Expect = 0.97
 Identities = 14/61 (22%), Positives = 27/61 (44%)
 Frame = -3

Query: 384  LDRHSHNFRTQRLLFLDKFFE*IHCC*DLIWQLGLLWWLSFSICSIRHTNTTCSRCNSSK 205
            ++R  H         LD F   + C   +   +GL W+++ ++ SI H N+      ++ 
Sbjct: 839  INRKEHKLTKGCGYHLDLFV--LACLIQICTMMGLPWFVAATVLSINHVNSLKKESETAA 896

Query: 204  P 202
            P
Sbjct: 897  P 897


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 217 APATSGIGVTNTTDAKTEPPKQTKLPNEISTT 312
           AP T+G      T A  +PP  +  P+  + T
Sbjct: 66  APGTAGPNAATVTAATPQPPAASMPPSTTTNT 97


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +1

Query: 295 NEISTTVDSFKEFV 336
           NEIS T D F EFV
Sbjct: 340 NEISYTTDKFTEFV 353


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.311    0.127    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,096
Number of Sequences: 2352
Number of extensions: 8620
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)