Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5f07
(686 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 27 0.22
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 2.7
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 2.7
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 2.7
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 2.7
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 3.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 3.6
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 22 6.3
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 22 6.3
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 6.3
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 6.3
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 6.3
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 6.3
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 6.3
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 26.6 bits (56), Expect = 0.22
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 226 TSGIGVTNTTDAKTEPPKQTKLPNEISTTVDSFKEFVKKQ 345
TS + N + + TEPPK I T + EF++KQ
Sbjct: 299 TSALQEMNKSKSITEPPKNCADSGSIWETGKNLFEFIRKQ 338
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/44 (20%), Positives = 19/44 (43%)
Frame = -1
Query: 332 NSLNESTVVEISFGSLVCFGGSVLASVVFVTPIPLVAGATPPSP 201
N+ N + ++ L + + + + P+P+ G PP P
Sbjct: 95 NNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFPPRP 138
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/44 (20%), Positives = 19/44 (43%)
Frame = -1
Query: 332 NSLNESTVVEISFGSLVCFGGSVLASVVFVTPIPLVAGATPPSP 201
N+ N + ++ L + + + + P+P+ G PP P
Sbjct: 95 NNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFPPRP 138
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/44 (20%), Positives = 19/44 (43%)
Frame = -1
Query: 332 NSLNESTVVEISFGSLVCFGGSVLASVVFVTPIPLVAGATPPSP 201
N+ N + ++ L + + + + P+P+ G PP P
Sbjct: 95 NNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFPPRP 138
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/44 (20%), Positives = 19/44 (43%)
Frame = -1
Query: 332 NSLNESTVVEISFGSLVCFGGSVLASVVFVTPIPLVAGATPPSP 201
N+ N + ++ L + + + + P+P+ G PP P
Sbjct: 95 NNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFPPRP 138
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 3.6
Identities = 9/46 (19%), Positives = 22/46 (47%)
Frame = -1
Query: 338 LTNSLNESTVVEISFGSLVCFGGSVLASVVFVTPIPLVAGATPPSP 201
+ +SL+ +T+ ++ + + + + P+P+ G PP P
Sbjct: 314 IISSLSNNTIHNNNYNKKLYYNIINIEQIPVPVPVPIHCGNFPPRP 359
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 217 APATSGIGVTNTTDAKTEPPKQTKLPN 297
APAT+ +T TT T T PN
Sbjct: 653 APATTITTITTTTTTTTTTTTTTTTPN 679
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 21.8 bits (44), Expect = 6.3
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = -3
Query: 612 LFKFRNQVLHVL 577
++K+ NQ+LH+L
Sbjct: 93 IYKWNNQILHIL 104
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 21.8 bits (44), Expect = 6.3
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = -3
Query: 612 LFKFRNQVLHVL 577
++K+ NQ+LH+L
Sbjct: 76 IYKWNNQILHIL 87
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/46 (21%), Positives = 21/46 (45%)
Frame = -1
Query: 338 LTNSLNESTVVEISFGSLVCFGGSVLASVVFVTPIPLVAGATPPSP 201
+++ LN + ++ L + + + + PIP+ G PP P
Sbjct: 304 ISSLLNNTIHNNNNYKKLQYYNINYIEQIPVPVPIPIYCGNFPPRP 349
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/46 (21%), Positives = 21/46 (45%)
Frame = -1
Query: 338 LTNSLNESTVVEISFGSLVCFGGSVLASVVFVTPIPLVAGATPPSP 201
+++ LN + ++ L + + + + PIP+ G PP P
Sbjct: 315 ISSLLNNTIHNNNNYKKLQYYNINYIEQIPVPVPIPIYCGNFPPRP 360
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/46 (21%), Positives = 21/46 (45%)
Frame = -1
Query: 338 LTNSLNESTVVEISFGSLVCFGGSVLASVVFVTPIPLVAGATPPSP 201
+++ LN + ++ L + + + + PIP+ G PP P
Sbjct: 315 ISSLLNNTIHNNNNYKKLQYYNINYIEQIPVPVPIPIYCGNFPPRP 360
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/46 (21%), Positives = 21/46 (45%)
Frame = -1
Query: 338 LTNSLNESTVVEISFGSLVCFGGSVLASVVFVTPIPLVAGATPPSP 201
+++ LN + ++ L + + + + PIP+ G PP P
Sbjct: 304 ISSLLNNTIHNNNNYKKLQYYNINYIEQIPVPVPIPIYCGNFPPRP 349
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 176 HRH*EHQASGLEELHRLQ 229
H H HQ L+ LH Q
Sbjct: 351 HHHHHHQTQSLQHLHYRQ 368
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.311 0.127 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,543
Number of Sequences: 438
Number of extensions: 2624
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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