Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5f02
         (745 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    25   0.64 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   3.4  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = -1

Query: 223 CVQFLGGIVVVYLF*SGVEKVLQLPIIETLL 131
           CV FLG I++ ++F   +  ++ + I +TL+
Sbjct: 235 CVFFLGSILIFFIFPLAILIIVYILIAKTLM 265


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 319 SVFIVCLSVLMASLNSACISL-RVKQSELHP 230
           SVF+V L VL+ +  S CI + +  +S L P
Sbjct: 210 SVFMVPLVVLIFTYTSICIEIWQSSESSLRP 240


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 441 HHKRIARLLGIKKIYHQEYKR 503
           H    A+L  I++IYHQE ++
Sbjct: 144 HSDYRAKLAQIRQIYHQELEK 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,083
Number of Sequences: 336
Number of extensions: 4007
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)