Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5e23
         (719 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    23   9.5  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    23   9.5  
AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical prote...    23   9.5  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   9.5  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   9.5  

>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +3

Query: 414 CLEHNYTREIVRLMTTLPVPSDRNTLSH 497
           C++ +Y   ++  M  LPVP++     H
Sbjct: 2   CVQLDYFNHLLHRMDVLPVPAEHREHLH 29


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +3

Query: 414 CLEHNYTREIVRLMTTLPVPSDRNTLSH 497
           C++ +Y   ++  M  LPVP++     H
Sbjct: 2   CVQLDYFNHLLHRMDVLPVPAEHREHLH 29


>AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical protein
           protein.
          Length = 89

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +3

Query: 414 CLEHNYTREIVRLMTTLPVPSDRNTLSH 497
           C++ +Y   ++  M  LPVP++     H
Sbjct: 2   CVQLDYFNHLLHRMDVLPVPAEHREHLH 29


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 598 DAVPGYSDAHASPPSTETVAAGG 530
           DA  G+S    SP   E  A GG
Sbjct: 890 DATGGFSTTTTSPKDPEEAAVGG 912


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 581 VPWNSVEQIGGCV*QCWSADGRRDEQDYWSIAGAI 685
           VP     QIGG V     A  RR E+DY     A+
Sbjct: 94  VPGIVAAQIGGIVFISCYARPRRPEEDYEGFLAAV 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 763,502
Number of Sequences: 2352
Number of extensions: 15285
Number of successful extensions: 42
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)