Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5e19
         (556 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.8  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   3.1  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    22   4.1  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    22   4.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.1  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   9.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   9.5  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 227 NTVATGVVYFHRFYMFHSF 283
           N VATG   FH+  +++SF
Sbjct: 165 NVVATGRFTFHKKNLYYSF 183


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = -2

Query: 462 KILSSVITSSLGFSPKLANFSSVNKDLATLI 370
           KIL S     L     +AN  SVN DL  LI
Sbjct: 70  KILDSWNEIDLHGLENVANLKSVNPDLKVLI 100


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 256 KINNPCGNSIIT*VHFRSCVDYESRS 179
           +++N C  +  T  +F+ C+D   RS
Sbjct: 80  QLHNLCRKNCFTTDYFKGCIDTLQRS 105


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 256 KINNPCGNSIIT*VHFRSCVDYESRS 179
           +++N C  +  T  +F+ C+D   RS
Sbjct: 80  QLHNLCRKNCFTTDYFKGCIDTLQRS 105


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/16 (37%), Positives = 8/16 (50%)
 Frame = -3

Query: 110 PFCHNTNKAFWKHLFY 63
           P CH     FW  L++
Sbjct: 223 PACHTLANTFWSALYF 238


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 89  YWYYDKKDLLNTPSFR 136
           Y Y + +DL+  PS+R
Sbjct: 128 YNYVEMRDLVTRPSYR 143


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 89  YWYYDKKDLLNTPSFR 136
           Y Y + +DL+  PS+R
Sbjct: 361 YNYVEMRDLVTRPSYR 376


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 89  YWYYDKKDLLNTPSFR 136
           Y Y + +DL+  PS+R
Sbjct: 361 YNYVEMRDLVTRPSYR 376


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +2

Query: 254 FHRFYMFHSFRTFPRYITACCCLFL 328
           F  F   +    F  Y+T  C LF+
Sbjct: 34  FENFVKTYLVSDFENYVTFFCSLFI 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,110
Number of Sequences: 336
Number of extensions: 2871
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)