Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5e19
         (556 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          72   1e-14
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          61   2e-11
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   3.9  
AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal ...    23   8.9  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 71.7 bits (168), Expect = 1e-14
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
 Frame = +2

Query: 122 TPSFRDGINNDAENRYRKEGARFIIDTGSKMDLGYNTVATGVVYFHRFYMFHSFRTFPRY 301
           TPS  DG++ + E   R  G   I   G  + L    +ATG V F RF+   SF      
Sbjct: 62  TPSQNDGLDRETETDLRILGCELIQTAGILLKLPQVAMATGQVLFQRFFYSKSFVRHSME 121

Query: 302 ITACCCLFLAGKVEETPKKCKDIIKV--------AKSLLTELKFASFGENPKEEVMTLER 457
            TA  C+ LA K+EE P++ +D+I V        ++  L  +       N K +V+  ER
Sbjct: 122 ATAMSCICLASKIEEAPRRIRDVINVFHHIKQVRSQKPLLPMILDQHYINLKSQVIKAER 181

Query: 458 ILLQTIKFDFQVXHPYGYLLKYAKCLK 538
            +L+ + F   V HP+  ++ Y K L+
Sbjct: 182 RVLKELGFCVHVKHPHKLIVMYLKYLE 208


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 61.3 bits (142), Expect = 2e-11
 Identities = 32/86 (37%), Positives = 44/86 (51%)
 Frame = +2

Query: 122 TPSFRDGINNDAENRYRKEGARFIIDTGSKMDLGYNTVATGVVYFHRFYMFHSFRTFPRY 301
           TPS  DG++ + E   R  G   I   G  + L    +ATG V F RF+   SF      
Sbjct: 62  TPSQNDGLDRETETDLRILGCELIQTAGILLKLPQVAMATGQVLFQRFFYSKSFVRHSME 121

Query: 302 ITACCCLFLAGKVEETPKKCKDIIKV 379
            TA  C+ LA K+EE P++ +D+I V
Sbjct: 122 ATAMSCICLASKIEEAPRRIRDVINV 147


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 95  YYDKKDLLNTPSFRDGINNDAENRY-RKEGARFIIDTGSKMDLGYNT 232
           Y D   ++ T S +  +  +A   + R  GAR  +D    +D+GY T
Sbjct: 683 YADDISVVTTSSQKIELVREAFEAFGRVSGARLNVDKTIALDVGYTT 729


>AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal
           carrier protein TOL-1 protein.
          Length = 272

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 125 PSFRDGINNDAENRYRKEGARFIIDTGSKMD 217
           PS  D I   + + Y+K G  F   TG+K+D
Sbjct: 165 PSGMDIIMRTSTDLYQKNGHVFYNVTGTKVD 195


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,277
Number of Sequences: 2352
Number of extensions: 11726
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)