Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5e11
         (770 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC127016-1|AAI27017.1|  259|Homo sapiens KRTAP10-8 protein protein.    31   4.6  
AB076355-1|BAD01542.1|  259|Homo sapiens keratin associated prot...    31   4.6  

>BC127016-1|AAI27017.1|  259|Homo sapiens KRTAP10-8 protein protein.
          Length = 259

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -2

Query: 766 CTINVLFLIHVAVQKTCVCNVWRI-TCRRNCA-PKRCCSSLCWENSKICRPA 617
           C+ +V  +  V+   TC  + W++  C+ +C  P+ C SS C      C PA
Sbjct: 20  CSSDVGRVSRVSSPSTCTGSSWQVDNCQESCCEPRSCASSCC--TPSCCAPA 69


>AB076355-1|BAD01542.1|  259|Homo sapiens keratin associated protein
           protein.
          Length = 259

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -2

Query: 766 CTINVLFLIHVAVQKTCVCNVWRI-TCRRNCA-PKRCCSSLCWENSKICRPA 617
           C+ +V  +  V+   TC  + W++  C+ +C  P+ C SS C      C PA
Sbjct: 20  CSSDVGRVSRVSSPSTCTGSSWQVDNCQESCCEPRSCASSCC--TPSCCAPA 69


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,230,648
Number of Sequences: 237096
Number of extensions: 2130066
Number of successful extensions: 4697
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4596
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)