Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5e09
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    26   0.26 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    26   0.26 
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   1.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   4.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.6  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   9.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 372 KFLTSYFIVLRSSQIFGTSAFNC 304
           KFL S  I L+ +QIFG   F C
Sbjct: 9   KFLNSLQIYLQHNQIFGFVTFTC 31



 Score = 24.6 bits (51), Expect = 0.78
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 372  KFLTSYFIVLRSSQIFGTSAFNCFN 298
            KF +S  ++L   QIFG   F C N
Sbjct: 1089 KFTSSIRMLLIQGQIFGLITFGCSN 1113


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 372 KFLTSYFIVLRSSQIFGTSAFNC 304
           KFL S  I L+ +QIFG   F C
Sbjct: 27  KFLNSLQIYLQHNQIFGFVTFTC 49


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = -1

Query: 372 KFLTSYFIVLRSSQIFGTSAFNCFNPRTA*YRVPTSLLFKLSL 244
           KF+ S  I+L  S+IFG      F P  + +R P+SL F L++
Sbjct: 10  KFVNSIRILLFQSRIFGLVT---FTPDRSKFR-PSSLRFCLNI 48


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -2

Query: 626 MQIHNHNWQVCHPFSAA 576
           + +H+ +W + +PF AA
Sbjct: 203 INLHHWHWHLVYPFEAA 219


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 5/17 (29%), Positives = 11/17 (64%)
 Frame = -2

Query: 626 MQIHNHNWQVCHPFSAA 576
           + +H+ +W + +PF  A
Sbjct: 203 LNLHHWHWHLVYPFEGA 219


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 687 ASITPSACEVVHSPQPMCSHNANT 616
           A +TPSA  +++  QP+ +  + T
Sbjct: 38  ALVTPSALSIIYYRQPIYAKISET 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,635
Number of Sequences: 336
Number of extensions: 3585
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)