Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5d24
(707 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 24 1.4
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 23 2.4
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 22 5.6
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 21 7.4
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 21 9.8
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 21 9.8
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 9.8
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.8
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 23.8 bits (49), Expect = 1.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 499 CRLSTHHYWCSCLWSYEG 552
C+ T HY C C + Y G
Sbjct: 76 CQDHTTHYTCHCPYGYTG 93
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = +2
Query: 107 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 250
+ +FK + +A+K +VV+DK K + + + + + D C +
Sbjct: 198 KTRFKTINNILENLWAKKLIVVKDKKKSRSDEQTIDICMRCHDQLCDM 245
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 21.8 bits (44), Expect = 5.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 261 GLKVTILCALLIHMSCHVMV*RLV*QIMLQHIQLVCY*HEDC 386
G K IL +L ++C VMV + + IQ+V Y + +C
Sbjct: 182 GNKPVILTVVLPLLACGVMVVTHITMAHFKIIQVVPYCYINC 223
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 389 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNK 291
E + +L ++ LNM Q + SH ++ VN+
Sbjct: 301 EQMNLLHSNDLNMHQQHHQQNMSHEELSAMVNR 333
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -3
Query: 573 LRPPSTAPFIAPKT 532
L PP++ P ++PK+
Sbjct: 106 LTPPNSEPLVSPKS 119
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +1
Query: 538 WSYEGCC*RWPQCSSFHQKIPWL*CRIQ 621
WS W CSSF Q+ C I+
Sbjct: 403 WSVNAGMWMWLSCSSFFQQFFHCYCPIK 430
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.0 bits (42), Expect = 9.8
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -2
Query: 112 YLVPLEVLFVLHNFNESHILNLSYKVASTDGHQAKRK 2
+LVP LH E H+ + YKV Q +K
Sbjct: 1228 HLVPQNCAPGLHYNPEEHMCDWKYKVKCVGRKQLAQK 1264
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -1
Query: 389 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 282
+A + IAD L ML L + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -1
Query: 389 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 282
+A + IAD L ML L + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -1
Query: 389 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 282
+A + IAD L ML L + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -1
Query: 389 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 282
+A + IAD L ML L + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,011
Number of Sequences: 336
Number of extensions: 4001
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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