Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5d22
         (593 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24691 Cluster: Manirer-2 protein; n=12; Eumetazoa|Rep:...    38   0.18 
UniRef50_Q4XY12 Cluster: Putative uncharacterized protein; n=5; ...    34   2.2  
UniRef50_Q45FI5 Cluster: Transposase; n=28; Pseudocoelomata|Rep:...    34   2.9  
UniRef50_UPI0000F30C2A Cluster: UPI0000F30C2A related cluster; n...    33   6.7  

>UniRef50_Q24691 Cluster: Manirer-2 protein; n=12; Eumetazoa|Rep:
           Manirer-2 protein - Dugesia tigrina (Planarian)
          Length = 365

 Score = 37.9 bits (84), Expect = 0.18
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = +3

Query: 135 VVLKQPDS*IDLQPLLLHNNARPHTARETV 224
           + +KQP     L P+LLH+NARPH+A+ TV
Sbjct: 225 LAIKQPKMFNRLTPILLHDNARPHSAKNTV 254


>UniRef50_Q4XY12 Cluster: Putative uncharacterized protein; n=5;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 1314

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 21/57 (36%), Positives = 29/57 (50%)
 Frame = +2

Query: 197 ETSYSTRNRFNSTGTAIRNHSLFAQTLLLHRTTIFFVIWTIFYVIKSYSNIYK*IKL 367
           E S   R R  S G    N  L  +  +L + +I+F I  +F+ I  YSNIY+ I L
Sbjct: 84  ENSNDQRKRNRSNGG---NEKLLVRLWMLIKKSIYFSILRLFFFIIEYSNIYENINL 137


>UniRef50_Q45FI5 Cluster: Transposase; n=28; Pseudocoelomata|Rep:
           Transposase - Adineta vaga
          Length = 345

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = +1

Query: 268 PDLVAPPDYNFFRNLDNFLRDKK 336
           PDL AP DY+ FR+L N LRDKK
Sbjct: 276 PDL-APTDYHLFRSLSNDLRDKK 297


>UniRef50_UPI0000F30C2A Cluster: UPI0000F30C2A related cluster;
           n=20; Bos taurus|Rep: UPI0000F30C2A UniRef100 entry -
           Bos Taurus
          Length = 318

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +1

Query: 253 PFVIRPDLVAPPDYNFFRNLDNFLRDK 333
           P ++    + P DY+FF+NLDNFL+ K
Sbjct: 246 PHLLYSHELLPIDYHFFKNLDNFLQGK 272


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,274,342
Number of Sequences: 1657284
Number of extensions: 10035862
Number of successful extensions: 17026
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17024
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)