Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5d18
         (661 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    24   3.7  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    24   4.9  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   8.5  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   8.5  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   8.5  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   8.5  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   8.5  

>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 15/63 (23%), Positives = 24/63 (38%)
 Frame = -3

Query: 323 LRSQYIFCKSHLAPLIQKPLWSRDYVRITNASQVKWPKRTSSSSNVIGFERNLPHNIYME 144
           +  +Y+   +H    + KP W   YVR    +       T+ +  VI  E     +I   
Sbjct: 142 ISERYVITAAHCT--VDKPNWKLLYVRFNEFNTSSADNCTTENDEVICREDYAVESIVPH 199

Query: 143 PRY 135
           P Y
Sbjct: 200 PEY 202


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 334 GISVCVPNTFSVKVIWRH*SKNH 266
           G  +C P T  V VI+ +  KNH
Sbjct: 130 GPDICGPGTKKVHVIFSYKGKNH 152


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 461 FVPLIDISRTNVHNLH 414
           FVP+I+I  T   NLH
Sbjct: 785 FVPVIEIDETFTSNLH 800


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 181 VLKGTCRITYTWSP 140
           + K TC+I  TW P
Sbjct: 126 IFKSTCKIDITWFP 139


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 181 VLKGTCRITYTWSP 140
           + K TC+I  TW P
Sbjct: 143 IFKSTCKIDITWFP 156


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 181 VLKGTCRITYTWSP 140
           + K TC+I  TW P
Sbjct: 143 IFKSTCKIDITWFP 156


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 181 VLKGTCRITYTWSP 140
           + K TC+I  TW P
Sbjct: 158 IFKSTCKIDITWFP 171


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,707
Number of Sequences: 2352
Number of extensions: 14681
Number of successful extensions: 30
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)