Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5d18
(661 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83822-1|CAI42541.1| 823|Homo sapiens PHD finger protein 16 pro... 38 0.042
D86969-1|BAA13205.2| 857|Homo sapiens KIAA0215 protein. 38 0.042
BC114487-1|AAI14488.1| 823|Homo sapiens PHD finger protein 16 p... 38 0.042
BC113880-1|AAI13881.1| 823|Homo sapiens PHD finger protein 16 p... 38 0.042
AF127774-1|AAD51905.1| 823|Homo sapiens unknown protein. 38 0.042
D87076-1|BAA13245.2| 849|Homo sapiens KIAA0239 protein. 33 0.90
BC021962-1|AAH21962.2| 791|Homo sapiens PHF15 protein protein. 33 0.90
AK074123-1|BAB84949.1| 639|Homo sapiens FLJ00195 protein protein. 33 0.90
BC032376-1|AAH32376.1| 509|Homo sapiens PHF17 protein protein. 32 1.6
AK127326-1|BAC86931.1| 830|Homo sapiens protein ( Homo sapiens ... 32 1.6
AK027620-1|BAB55239.1| 509|Homo sapiens protein ( Homo sapiens ... 32 1.6
AF520952-1|AAM95612.1| 509|Homo sapiens PHD protein Jade-1 prot... 32 1.6
AC108024-1|AAY40997.1| 327|Homo sapiens unknown protein. 32 1.6
>Z83822-1|CAI42541.1| 823|Homo sapiens PHD finger protein 16
protein.
Length = 823
Score = 37.5 bits (83), Expect = 0.042
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 601 PAELFRKDLISAMKLPDN 654
PAE+FRKDLISAMKLPD+
Sbjct: 40 PAEVFRKDLISAMKLPDS 57
>D86969-1|BAA13205.2| 857|Homo sapiens KIAA0215 protein.
Length = 857
Score = 37.5 bits (83), Expect = 0.042
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 601 PAELFRKDLISAMKLPDN 654
PAE+FRKDLISAMKLPD+
Sbjct: 74 PAEVFRKDLISAMKLPDS 91
>BC114487-1|AAI14488.1| 823|Homo sapiens PHD finger protein 16
protein.
Length = 823
Score = 37.5 bits (83), Expect = 0.042
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 601 PAELFRKDLISAMKLPDN 654
PAE+FRKDLISAMKLPD+
Sbjct: 40 PAEVFRKDLISAMKLPDS 57
>BC113880-1|AAI13881.1| 823|Homo sapiens PHD finger protein 16
protein.
Length = 823
Score = 37.5 bits (83), Expect = 0.042
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 601 PAELFRKDLISAMKLPDN 654
PAE+FRKDLISAMKLPD+
Sbjct: 40 PAEVFRKDLISAMKLPDS 57
>AF127774-1|AAD51905.1| 823|Homo sapiens unknown protein.
Length = 823
Score = 37.5 bits (83), Expect = 0.042
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 601 PAELFRKDLISAMKLPDN 654
PAE+FRKDLISAMKLPD+
Sbjct: 40 PAEVFRKDLISAMKLPDS 57
>D87076-1|BAA13245.2| 849|Homo sapiens KIAA0239 protein.
Length = 849
Score = 33.1 bits (72), Expect = 0.90
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 583 RSASEAPAELFRKDLISAMKLPDN 654
R + P+E+FR DLI+AMK+PD+
Sbjct: 102 RQNEKKPSEVFRTDLITAMKIPDS 125
>BC021962-1|AAH21962.2| 791|Homo sapiens PHF15 protein protein.
Length = 791
Score = 33.1 bits (72), Expect = 0.90
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 583 RSASEAPAELFRKDLISAMKLPDN 654
R + P+E+FR DLI+AMK+PD+
Sbjct: 43 RQNEKKPSEVFRTDLITAMKIPDS 66
>AK074123-1|BAB84949.1| 639|Homo sapiens FLJ00195 protein protein.
Length = 639
Score = 33.1 bits (72), Expect = 0.90
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 583 RSASEAPAELFRKDLISAMKLPDN 654
R + P+E+FR DLI+AMK+PD+
Sbjct: 120 RQNEKKPSEVFRTDLITAMKIPDS 143
>BC032376-1|AAH32376.1| 509|Homo sapiens PHF17 protein protein.
Length = 509
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 478 RGEEPSTSKRRRMEPE-DPLWQLRPVSDLKMSSIYNRSASEAPAELFRKDLISAMKLPDN 654
RG PS+S+ W S + SS +R P+E+FR DLI+AMKL D+
Sbjct: 3 RGRLPSSSEDSDDNGSLSTTWSQNSRSQHRRSSC-SRHEDRKPSEVFRTDLITAMKLHDS 61
>AK127326-1|BAC86931.1| 830|Homo sapiens protein ( Homo sapiens
cDNA FLJ45397 fis, clone BRHIP3027651, weakly similar
to Bromodomain-containing protein 1. ).
Length = 830
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 478 RGEEPSTSKRRRMEPE-DPLWQLRPVSDLKMSSIYNRSASEAPAELFRKDLISAMKLPDN 654
RG PS+S+ W S + SS +R P+E+FR DLI+AMKL D+
Sbjct: 3 RGRLPSSSEDSDDNGSLSTTWSQNSRSQHRRSSC-SRHEDRKPSEVFRTDLITAMKLHDS 61
>AK027620-1|BAB55239.1| 509|Homo sapiens protein ( Homo sapiens
cDNA FLJ14714 fis, clone NT2RP3001107, weakly similar to
PEREGRIN. ).
Length = 509
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 478 RGEEPSTSKRRRMEPE-DPLWQLRPVSDLKMSSIYNRSASEAPAELFRKDLISAMKLPDN 654
RG PS+S+ W S + SS +R P+E+FR DLI+AMKL D+
Sbjct: 3 RGRLPSSSEDSDDNGSLSTTWSQNSRSQHRRSSC-SRHEDRKPSEVFRTDLITAMKLHDS 61
>AF520952-1|AAM95612.1| 509|Homo sapiens PHD protein Jade-1
protein.
Length = 509
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 478 RGEEPSTSKRRRMEPE-DPLWQLRPVSDLKMSSIYNRSASEAPAELFRKDLISAMKLPDN 654
RG PS+S+ W S + SS +R P+E+FR DLI+AMKL D+
Sbjct: 3 RGRLPSSSEDSDDNGSLSTTWSQNSRSQHRRSSC-SRHEDRKPSEVFRTDLITAMKLHDS 61
>AC108024-1|AAY40997.1| 327|Homo sapiens unknown protein.
Length = 327
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 478 RGEEPSTSKRRRMEPE-DPLWQLRPVSDLKMSSIYNRSASEAPAELFRKDLISAMKLPDN 654
RG PS+S+ W S + SS +R P+E+FR DLI+AMKL D+
Sbjct: 3 RGRLPSSSEDSDDNGSLSTTWSQNSRSQHRRSSC-SRHEDRKPSEVFRTDLITAMKLHDS 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,373,913
Number of Sequences: 237096
Number of extensions: 2075931
Number of successful extensions: 7716
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7716
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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