Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5d18
         (661 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc fin...    77   2e-14
AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB, ...    77   2e-14
AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA, ...    77   2e-14
AE014297-1898|AAS65153.1|  190|Drosophila melanogaster CG33330-P...    29   7.4  

>AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc finger
           protein rhinoceros protein.
          Length = 3241

 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 34/42 (80%), Positives = 40/42 (95%)
 Frame = +1

Query: 535 WQLRPVSDLKMSSIYNRSASEAPAELFRKDLISAMKLPDNEP 660
           WQ R V+D+KMSSIYNRS++EAPAEL+RKDLISAMKLPD+EP
Sbjct: 124 WQARSVADIKMSSIYNRSSTEAPAELYRKDLISAMKLPDSEP 165


>AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB,
           isoform B protein.
          Length = 3241

 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 34/42 (80%), Positives = 40/42 (95%)
 Frame = +1

Query: 535 WQLRPVSDLKMSSIYNRSASEAPAELFRKDLISAMKLPDNEP 660
           WQ R V+D+KMSSIYNRS++EAPAEL+RKDLISAMKLPD+EP
Sbjct: 124 WQARSVADIKMSSIYNRSSTEAPAELYRKDLISAMKLPDSEP 165


>AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA,
           isoform A protein.
          Length = 3201

 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 34/42 (80%), Positives = 40/42 (95%)
 Frame = +1

Query: 535 WQLRPVSDLKMSSIYNRSASEAPAELFRKDLISAMKLPDNEP 660
           WQ R V+D+KMSSIYNRS++EAPAEL+RKDLISAMKLPD+EP
Sbjct: 124 WQARSVADIKMSSIYNRSSTEAPAELYRKDLISAMKLPDSEP 165


>AE014297-1898|AAS65153.1|  190|Drosophila melanogaster CG33330-PA
           protein.
          Length = 190

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = -3

Query: 305 FCKSHLAPLIQKPLWSRDYVRITNASQVKWPKRTSSSSNVIGFERNLPHNIY 150
           F  S+LA  ++KP +     R+ N +   W + +SSS   I  ER LPH ++
Sbjct: 10  FLTSNLANTVEKPNF-----RLNNQNWQLW-QTSSSSQGKIQMERYLPHELH 55


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,093,747
Number of Sequences: 53049
Number of extensions: 632770
Number of successful extensions: 1502
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1500
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)