Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5d10
         (369 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099919-12|AAC68797.1|   63|Caenorhabditis elegans Hypothetical...    89   7e-19
Z98877-10|CAB63406.1|  314|Caenorhabditis elegans Hypothetical p...    27   3.2  
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr...    27   4.2  
Z75713-3|CAB54301.1|  419|Caenorhabditis elegans Hypothetical pr...    27   4.2  
Z75713-2|CAB00051.2|  422|Caenorhabditis elegans Hypothetical pr...    27   4.2  
X51321-1|CAA35704.1|  422|Caenorhabditis elegans hypothetical pr...    27   4.2  
Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z36948-2|CAA85410.1|  268|Caenorhabditis elegans Hypothetical pr...    26   7.3  
U80440-3|AAK21470.2|  380|Caenorhabditis elegans Hypothetical pr...    26   7.3  
Z75547-3|CAA99902.1|  335|Caenorhabditis elegans Hypothetical pr...    26   9.7  
Z48543-2|CAA88433.2|  478|Caenorhabditis elegans Hypothetical pr...    26   9.7  
AC024842-4|AAY43991.1|  703|Caenorhabditis elegans Hypothetical ...    26   9.7  
AC024842-3|AAP13732.1| 1111|Caenorhabditis elegans Hypothetical ...    26   9.7  
AC024842-2|ABA00150.1|  604|Caenorhabditis elegans Hypothetical ...    26   9.7  
AC024842-1|AAF59622.4| 1127|Caenorhabditis elegans Hypothetical ...    26   9.7  

>AF099919-12|AAC68797.1|   63|Caenorhabditis elegans Hypothetical
           protein F40G9.2 protein.
          Length = 63

 Score = 89.4 bits (212), Expect = 7e-19
 Identities = 38/45 (84%), Positives = 38/45 (84%)
 Frame = +1

Query: 133 KLKPCCACPETKRARDACIIENGEENCGPLIEEHKACMRKMGFNI 267
           KLK CCACPETKR RDACIIENGEE CG LIE HKACMR  GFNI
Sbjct: 19  KLKACCACPETKRVRDACIIENGEEKCGKLIEAHKACMRAAGFNI 63


>Z98877-10|CAB63406.1|  314|Caenorhabditis elegans Hypothetical
           protein Y69H2.9 protein.
          Length = 314

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
 Frame = +1

Query: 139 KPCCACPETKRARDACIIE-------NGEENCGPLIEEHKACMRK 252
           K   AC E+KRA +AC++E         E NC    E+H+ C+ K
Sbjct: 212 KSTIACSESKRAVNACVVEFFICYTMFTEANC---TEKHENCVSK 253


>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
            T01D3.7 protein.
          Length = 2882

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +1

Query: 58   MGNASAKAVEVKVLEGPAPENVEKPKLKPCCACPETKRARDACIIE 195
            +GN+  K +   + +G  P   +   + P C CP+ K      +IE
Sbjct: 1046 IGNSEPKPIHFTLYDGCEPSLCQGSCVGPLCICPQGKTGIFCDVIE 1091


>Z75713-3|CAB54301.1|  419|Caenorhabditis elegans Hypothetical
           protein T01G9.2b protein.
          Length = 419

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +1

Query: 64  NASAKAVEVKVLEGPAPENVEKPKLKPCCACPETKRARDACIIENG 201
           N+  K  ++ +  GP P   E       C C + +  +   I ENG
Sbjct: 180 NSQPKLTKMSIYRGPNPSEPESVDTPFSCYCGQNRTRKVEAIWENG 225


>Z75713-2|CAB00051.2|  422|Caenorhabditis elegans Hypothetical
           protein T01G9.2a protein.
          Length = 422

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +1

Query: 64  NASAKAVEVKVLEGPAPENVEKPKLKPCCACPETKRARDACIIENG 201
           N+  K  ++ +  GP P   E       C C + +  +   I ENG
Sbjct: 183 NSQPKLTKMSIYRGPNPSEPESVDTPFSCYCGQNRTRKVEAIWENG 228


>X51321-1|CAA35704.1|  422|Caenorhabditis elegans hypothetical
           protein protein.
          Length = 422

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +1

Query: 64  NASAKAVEVKVLEGPAPENVEKPKLKPCCACPETKRARDACIIENG 201
           N+  K  ++ +  GP P   E       C C + +  +   I ENG
Sbjct: 183 NSQPKLTKMSIYRGPNPSEPESVDTPFSCYCGQNRTRKVEAIWENG 228


>Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 145 CCACPETKRARDACIIENGEENCGPLIEEHKACMRK 252
           CC+  +T++ +  C+    +   G  IEE   C RK
Sbjct: 418 CCSISKTRKRQSECLEGQFKCGTGQCIEESLKCNRK 453


>Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 145 CCACPETKRARDACIIENGEENCGPLIEEHKACMRK 252
           CC+  +T++ +  C+    +   G  IEE   C RK
Sbjct: 418 CCSISKTRKRQSECLEGQFKCGTGQCIEESLKCNRK 453


>Z36948-2|CAA85410.1|  268|Caenorhabditis elegans Hypothetical
           protein D2089.3 protein.
          Length = 268

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 142 PCCACPETKRARDACIIENGEENCGPLIEEHK 237
           PC AC +     DAC +  G   C P +   +
Sbjct: 218 PCSACNQPVCMSDACSLFFGANFCAPCVSRER 249


>U80440-3|AAK21470.2|  380|Caenorhabditis elegans Hypothetical
           protein T21E12.2 protein.
          Length = 380

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 146 QGFSLGFSTFSGAGPSKTLTSTALALAFPIFQEVFS 39
           +G ++GF+T S    S  ++      AF +FQ  FS
Sbjct: 95  EGRTIGFNTLSSRDTSLLISQATNTTAFNMFQHSFS 130


>Z75547-3|CAA99902.1|  335|Caenorhabditis elegans Hypothetical
           protein R11D1.2 protein.
          Length = 335

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +2

Query: 158 LKQKEHAMHAL*KMEKRTVDHLLKNTRPV*E-KWDSIFKVILNFQSKYY*LQSTYDSIAY 334
           LK K  A+    K E+  +  L++  R     KW+S++    +F + +  ++  YD IA 
Sbjct: 198 LKCKSIALRCT-KFERNDLKELIRKWRAGWTPKWESLYIKFWSFVNVFECVEGDYDIIAT 256

Query: 335 LSANQFQYEKK 367
              N+   E +
Sbjct: 257 RQRNEINLESQ 267


>Z48543-2|CAA88433.2|  478|Caenorhabditis elegans Hypothetical
           protein C18D1.2 protein.
          Length = 478

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -1

Query: 285 KFSMTLNIESHFSHTGLVFFNKWSTVLFSIFYNACIACSF 166
           +F   + + + F+  G+V   +WS  +   F+ AC++C F
Sbjct: 141 RFLQGIGLSTGFTLIGIVT-RQWSMQVQGAFFFACLSCFF 179


>AC024842-4|AAY43991.1|  703|Caenorhabditis elegans Hypothetical
           protein Y59H11AR.2c protein.
          Length = 703

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +1

Query: 151 ACPETKRARDA-CIIENGEENCGPLIEEHKACMRKMGFNI*SHTEFSIKVLLATKYLRQH 327
           A P T +  D  C+I    E    L+  + A +   G+++       +   +AT Y +  
Sbjct: 449 AAPFTSKVADIRCVITLISEGRAALVTSYSAFLCMAGYSLTQFISILLLYWIATSYSQMQ 508

Query: 328 CLFVSKSV 351
            LF+  ++
Sbjct: 509 FLFIDIAI 516


>AC024842-3|AAP13732.1| 1111|Caenorhabditis elegans Hypothetical
            protein Y59H11AR.2b protein.
          Length = 1111

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +1

Query: 151  ACPETKRARDA-CIIENGEENCGPLIEEHKACMRKMGFNI*SHTEFSIKVLLATKYLRQH 327
            A P T +  D  C+I    E    L+  + A +   G+++       +   +AT Y +  
Sbjct: 857  AAPFTSKVADIRCVITLISEGRAALVTSYSAFLCMAGYSLTQFISILLLYWIATSYSQMQ 916

Query: 328  CLFVSKSV 351
             LF+  ++
Sbjct: 917  FLFIDIAI 924


>AC024842-2|ABA00150.1|  604|Caenorhabditis elegans Hypothetical
           protein Y59H11AR.2d protein.
          Length = 604

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +1

Query: 151 ACPETKRARDA-CIIENGEENCGPLIEEHKACMRKMGFNI*SHTEFSIKVLLATKYLRQH 327
           A P T +  D  C+I    E    L+  + A +   G+++       +   +AT Y +  
Sbjct: 350 AAPFTSKVADIRCVITLISEGRAALVTSYSAFLCMAGYSLTQFISILLLYWIATSYSQMQ 409

Query: 328 CLFVSKSV 351
            LF+  ++
Sbjct: 410 FLFIDIAI 417


>AC024842-1|AAF59622.4| 1127|Caenorhabditis elegans Hypothetical
            protein Y59H11AR.2a protein.
          Length = 1127

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +1

Query: 151  ACPETKRARDA-CIIENGEENCGPLIEEHKACMRKMGFNI*SHTEFSIKVLLATKYLRQH 327
            A P T +  D  C+I    E    L+  + A +   G+++       +   +AT Y +  
Sbjct: 873  AAPFTSKVADIRCVITLISEGRAALVTSYSAFLCMAGYSLTQFISILLLYWIATSYSQMQ 932

Query: 328  CLFVSKSV 351
             LF+  ++
Sbjct: 933  FLFIDIAI 940


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,943,966
Number of Sequences: 27780
Number of extensions: 150020
Number of successful extensions: 431
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)